Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04418 and BSU30330

See Amino acid alignment / Visit BSNT_04418 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:07
# Commandline: needle
#    -asequence dna-align/BSNT_04418___ytvB.1.22522.seq
#    -bsequence dna-align/BSU30330___ytvB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04418___ytvB-BSU30330___ytvB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04418___ytvB-BSU30330___ytvB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04418___ytvB
# 2: BSU30330___ytvB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 330
# Identity:     288/330 (87.3%)
# Similarity:   288/330 (87.3%)
# Gaps:          42/330 (12.7%)
# Score: 1440.0
# 
#
#=======================================

BSNT_04418___      1 ------------------------------------------ATGGGGAT      8
                                                               ||||||||
BSU30330___yt      1 ATGCTGCATCAGGTACTCATTGCTTGTGTAATTGGAGGAATCATGGGGAT     50

BSNT_04418___      9 TCTCGGTCATGTGAAAAAGAGAGGCAGGCTGGAGAAGCCCAGAATGACGA     58
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30330___yt     51 TCTCGGTCATGTGAAAAAGAGAGGCAGGCTGGAGAAGCCCAGAATGACGA    100

BSNT_04418___     59 AGCGGTTTATCTACCTTGGATTTTTGGAAGATTGGTTTATCGGCATGACG    108
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30330___yt    101 AGCGGTTTATCTACCTTGGATTTTTGGAAGATTGGTTTATCGGCATGACG    150

BSNT_04418___    109 GCTTCCATTTTACTTGTATTATCCGCTGACCCCGATTCAGGAATTCAACT    158
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30330___yt    151 GCTTCCATTTTACTTGTATTATCCGCTGACCCCGATTCAGGAATTCAACT    200

BSNT_04418___    159 TGTCATCTTATCCATTATCTCAGGCTACGGCGGTGAAGCTGTTCTCAGAA    208
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30330___yt    201 TGTCATCTTATCCATTATCTCAGGCTACGGCGGTGAAGCTGTTCTCAGAA    250

BSNT_04418___    209 GTTTTGACTTTGTGAGAGAACTGAACAGCGGCGGCGAACCGGCCGAGTCC    258
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30330___yt    251 GTTTTGACTTTGTGAGAGAACTGAACAGCGGCGGCGAACCGGCCGAGTCC    300

BSNT_04418___    259 AAACGTCAAACCAAAACTCCACCCGAATAA    288
                     ||||||||||||||||||||||||||||||
BSU30330___yt    301 AAACGTCAAACCAAAACTCCACCCGAATAA    330


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