Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04407 and BSU30270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:06
# Commandline: needle
# -asequence dna-align/BSNT_04407___msmE.1.22522.seq
# -bsequence dna-align/BSU30270___msmE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04407___msmE-BSU30270___msmE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04407___msmE-BSU30270___msmE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04407___msmE
# 2: BSU30270___msmE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1281
# Identity: 1258/1281 (98.2%)
# Similarity: 1258/1281 (98.2%)
# Gaps: 0/1281 ( 0.0%)
# Score: 6198.0
#
#
#=======================================
BSNT_04407___ 1 ATGAAACACACTTTTGTTTTATTTCTCTCTCTTATTCTGCTTGTTCTGCC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 1 ATGAAACACACTTTTGTTTTATTTCTCTCTCTTATTCTGCTTGTTCTGCC 50
BSNT_04407___ 51 CGGGTGTTCAGCAGAGAAAAGCTCAGCAGATACCGCAAAAAAGACGTTAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 51 CGGGTGTTCAGCAGAGAAAAGCTCAGCAGATACCGCAAAAAAGACGTTAA 100
BSNT_04407___ 101 CCATTTATTCTACAATGTCAACCGACAGTGAAAGAGATACGTTCAGAAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 101 CCATTTATTCTACAATGTCAACCGACAGTGAAAGAGATACGTTCAGAAAA 150
BSNT_04407___ 151 CTGGCGGCAGCATTCGAAAAGGAACACAGTGACATTCATGTCAGCCTTCA 200
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 151 CTAGCGGCAGCATTCGAAAAGGAACACAGTGACATTCATGTCAGCCTTCA 200
BSNT_04407___ 201 TTTCCCAGGCAATGACTATGAAAATATGATGCGTGTCAGAATGGCGGCCA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 201 TTTCCCAGGCAATGACTATGAAAATATGATGCGTGTCAGAATGGCGGCCA 250
BSNT_04407___ 251 ATGATTTGCCTGATCTATTCGATACACATGGCTGGGGGAAAATCAGGTAC 300
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU30270___ms 251 ATGATTTGCCAGATCTATTCGATACACATGGCTGGGGGAAAATCAGGTAC 300
BSNT_04407___ 301 GGAGAATATACAGCGGATCTCCGGGATATGGAATGGACTCAAGATCTTGA 350
||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU30270___ms 301 GGAGAATATACAGCGGATCTCCGGGATATGAAATGGACTCAAGATCTTGA 350
BSNT_04407___ 351 TCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGAAAGGTGTATGCCT 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 351 TCCCAATTTAAACAGCATCCTCAAAAATAAAAGCGGAAAGGTGTATGCCT 400
BSNT_04407___ 401 ATCCGATCAATCAGGCAAAAGACGGTCTGGCGTATAACCGCAATATTTTG 450
||||.||||||||||||||||||||||||||||||||.|||||||||||.
BSU30270___ms 401 ATCCAATCAATCAGGCAAAAGACGGTCTGGCGTATAATCGCAATATTTTA 450
BSNT_04407___ 451 GACCGTTACGGCATTGCTCCGCCGGAAACCATGGATGACTTTATCAAAGC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 451 GACCGTTACGGCATTGCTCCGCCGGAAACCATGGATGACTTTATCAAAGC 500
BSNT_04407___ 501 ACTGAGAACGATTAAAGAAAAGAGCAAGGGAAGCATTGTTCCCTTCTGGT 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 501 ACTGAGAACGATTAAAGAAAAGAGCAAGGGAAGCATTGTTCCCTTCTGGT 550
BSNT_04407___ 551 TTGCCGGCTATGACAAAAGCTCATTCGCTCAATATTACGACCAATTCGCT 600
|||||||.||||||||||||||||||||.|||||||||||||||||||||
BSU30270___ms 551 TTGCCGGATATGACAAAAGCTCATTCGCCCAATATTACGACCAATTCGCT 600
BSNT_04407___ 601 ACACCTCTTCTCATCACAGACCCTGCCCATAATGAAAAAAAACAGCTCAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 601 ACACCTCTTCTCATCACAGACCCTGCCCATAATGAAAAAAAACAGCTCAT 650
BSNT_04407___ 651 CAACGGCACTTTTCAATGGAATAAATTTACTTGCTTATCAAAAATCCTCA 700
||||||||||||||||||||.||||||.||||..||||||.|||||||||
BSU30270___ms 651 CAACGGCACTTTTCAATGGAGTAAATTCACTTATTTATCAGAAATCCTCA 700
BSNT_04407___ 701 AACAAATGCAGAAAGAAAAATTGATCAATATCGACGCCGTCACGGCAAAA 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 701 AACAAATGCAGAAAGAAAAATTGATCAATATCGACGCCGTCACGGCAAAA 750
BSNT_04407___ 751 AAATCACAGCTCATCGAATTAATGGCCCAAAACAAAATCGCCTTTACAAT 800
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU30270___ms 751 AAATCACAGCTCATTGAATTAATGGCCCAAAACAAAATCGCCTTTACAAT 800
BSNT_04407___ 801 GCAAGGCGGCACCCTCGGCCAAGACGTTGCCCAGATCAACTCTAACGTCG 850
||||||||||||.|||||||||||||||||||||||||||.|.||||||.
BSU30270___ms 801 GCAAGGCGGCACACTCGGCCAAGACGTTGCCCAGATCAACCCGAACGTCA 850
BSNT_04407___ 851 AGGTCGGCATTATCCCGACACCTGCCATCCATCCCGGTGATGACCCGATA 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 851 AGGTCGGCATTATCCCGACACCTGCCATCCATCCCGGTGATGACCCGATA 900
BSNT_04407___ 901 TGGATCGGCGGTGAACGCTACACGCTTGCAGCATGGAAAGATTCGTCTCA 950
|||||||||||||||||||||||.|||||||||||||||||||||.||||
BSU30270___ms 901 TGGATCGGCGGTGAACGCTACACCCTTGCAGCATGGAAAGATTCGCCTCA 950
BSNT_04407___ 951 ATTAAAAGAGGCAAAAGAATTTATCGCATTTATGGCCCGCCCGGCCAATG 1000
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU30270___ms 951 ATTAAAAGAGGCAAAAGATTTTATCGCATTTATGGCCCGCCCGGCCAATG 1000
BSNT_04407___ 1001 CCAAACAAATGGCTGAAGCCACATCGCTTCCTTCAGGGCTGACCAATGTG 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 1001 CCAAACAAATGGCTGAAGCCACATCGCTTCCTTCAGGGCTGACCAATGTG 1050
BSNT_04407___ 1051 AAAGCTGATATTTTCTACGCAAACGATTATGAGCATTATCAAGATGTCAA 1100
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU30270___ms 1051 AAAGCTGATATTTTCTACGCAAACGATTATGAGTATTATCAAGATGTCAA 1100
BSNT_04407___ 1101 AGTCGAGCCTTACTTCGACCGGTTATACTTGCCAAACGGAATGTGGGATG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 1101 AGTCGAGCCTTACTTCGACCGGTTATACTTGCCAAACGGAATGTGGGATG 1150
BSNT_04407___ 1151 TCCTGGGCACGGTTGGGCAGGAGCTCGCGGCTGACATTTTGGCGCCTCAA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 1151 TCCTGGGCACGGTTGGGCAGGAGCTCGCGGCTGACATTTTGGCGCCTCAA 1200
BSNT_04407___ 1201 GACATTTCGCAGAAGCTGGGAAGAGAATATAAACGACTCCGGGAGCAATC 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30270___ms 1201 GACATTTCGCAGAAGCTGGGAAGAGAATATAAACGACTCCGGGAGCAATC 1250
BSNT_04407___ 1251 GGAAACACAGGGAGCTGAAAACAATGAGTGA 1281
.||||||||||||||||||||||||||||||
BSU30270___ms 1251 CGAAACACAGGGAGCTGAAAACAATGAGTGA 1281
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