Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04397 and BSU30190

See Amino acid alignment / Visit BSNT_04397 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_04397___bioI.1.22522.seq
#    -bsequence dna-align/BSU30190___bioI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04397___bioI-BSU30190___bioI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04397___bioI-BSU30190___bioI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04397___bioI
# 2: BSU30190___bioI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1233
# Identity:    1168/1233 (94.7%)
# Similarity:  1168/1233 (94.7%)
# Gaps:          45/1233 ( 3.6%)
# Score: 5760.0
# 
#
#=======================================

BSNT_04397___      1 ATGATGTCGATTGCTTTTATTTTTGAACAGAAAGGAGAAAATCACGTGAC     50
                                                                  |||||
BSU30190___bi      1 ---------------------------------------------GTGAC      5

BSNT_04397___     51 AATTGCATCGTCAACTGCATCTTCTGAGTTTTTGAAAAACCCATATTCTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi      6 AATTGCATCGTCAACTGCATCTTCTGAGTTTTTGAAAAACCCATATTCTT     55

BSNT_04397___    101 TTTACGACACATTGCGAGCTGTTCATCCTATCTATAAAGGGAGTTTCTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi     56 TTTACGACACATTGCGAGCTGTTCATCCTATCTATAAAGGGAGTTTCTTA    105

BSNT_04397___    151 AAATACCCGGGCTGGTATGTCACAGGATATGAAGAAACGGCTGCTATTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    106 AAATACCCGGGCTGGTATGTCACAGGATATGAAGAAACGGCTGCTATTTT    155

BSNT_04397___    201 GAAAGATGCGAGATTCAAAGTCCGCACCCCGCTGCCTGAGAGCTCAACCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    156 GAAAGATGCGAGATTCAAAGTCCGCACCCCGCTGCCTGAGAGCTCAACCA    205

BSNT_04397___    251 AATATCAGGACCTTTCACATGTGCAAAATCAAATGATGCTGTTTCAGAAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    206 AATATCAGGACCTTTCACATGTGCAAAATCAAATGATGCTGTTTCAGAAC    255

BSNT_04397___    301 CAGCCTGATCATAGACGATTGCGGACGCTTGCCAGCGGAGCGTTTACGCC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    256 CAGCCTGATCATAGACGATTGCGGACGCTTGCCAGCGGAGCGTTTACGCC    305

BSNT_04397___    351 GAGAGCGACAGAGAGTTATCAGCCGTATATCATTGAAACTGTCCACCAAT    400
                     ||||.||||||||||||||||||||||||||||||||||||||||.||.|
BSU30190___bi    306 GAGAACGACAGAGAGTTATCAGCCGTATATCATTGAAACTGTCCATCATT    355

BSNT_04397___    401 TGCTTGATCAAGTGCAAGGTGAAAAAAAGATGGAGGTCATTTCGGACTTT    450
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU30190___bi    356 TGCTTGATCAAGTGCAAGGTAAAAAAAAGATGGAGGTCATTTCGGACTTT    405

BSNT_04397___    451 GCTTTTCCTTTAGCAAGCTTTGTCATCGCTAACATTATAGGTGTACCGGA    500
                     |||||||||||||||||.||||||||.|||||||||||||||||||||||
BSU30190___bi    406 GCTTTTCCTTTAGCAAGTTTTGTCATAGCTAACATTATAGGTGTACCGGA    455

BSNT_04397___    501 GGAAGATAGGGAGCAATTAAAGGAGTGGGCTGCGAGTCTCATTCAAACGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    456 GGAAGATAGGGAGCAATTAAAGGAGTGGGCTGCGAGTCTCATTCAAACGA    505

BSNT_04397___    551 TTGATTTTACCCGGTCAAGAAAGGCATTAACAGAGGGCAATCATATGGCT    600
                     |||||||||||||.|||||||||||||||||||||||||||..|||||||
BSU30190___bi    506 TTGATTTTACCCGCTCAAGAAAGGCATTAACAGAGGGCAATATTATGGCT    555

BSNT_04397___    601 GTGCAGGCTATGGCATATTTCAAAGAGCTGATTCAAAAGAGAAAACGCCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    556 GTGCAGGCTATGGCATATTTCAAAGAGCTGATTCAAAAGAGAAAACGCCA    605

BSNT_04397___    651 CCCTCAACAGGATATGATCAGCATGCTCTTGAAGGGGAAAGAAAATGATA    700
                     ||||||||||||||||||||||||||||||||||||||.||||||.||||
BSU30190___bi    606 CCCTCAACAGGATATGATCAGCATGCTCTTGAAGGGGAGAGAAAAGGATA    655

BSNT_04397___    701 AGCTGACGGAAGAGGAGGCGGCATCTACGTGCATATTGCTGGCGATCGCC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    656 AGCTGACGGAAGAGGAGGCGGCATCTACGTGCATATTGCTGGCGATCGCC    705

BSNT_04397___    751 GGACATGAGACAACGGTTAATCTCATCAGCAATTCAGTCCTTTGTCTGCT    800
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU30190___bi    706 GGACATGAGACAACGGTCAATCTCATCAGCAATTCAGTCCTTTGTCTGCT    755

BSNT_04397___    801 GCAGCATCCAGAACAGCTTTTGAAACTGAGAGAAAATCCAGATCTTATTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    756 GCAGCATCCAGAACAGCTTTTGAAACTGAGAGAAAATCCAGATCTTATTG    805

BSNT_04397___    851 GTACCGCAGTTGAGGAATGTTTACGCTATGAAAGCCCCACGCAAATGACA    900
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU30190___bi    806 GTACCGCAGTCGAGGAATGTTTACGCTATGAAAGCCCCACGCAAATGACA    855

BSNT_04397___    901 GCCAGAGTTGCGTCAGAGGATATTGACATCAGCGGGGTGACGATCCGTCA    950
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU30190___bi    856 GCCAGAGTTGCGTCAGAGGATATTGACATCTGCGGGGTGACGATCCGTCA    905

BSNT_04397___    951 AGGAGAGCAAGTCTATCTTTTGTTAGGAGCGGCTAATCGAGACCCTAGCA   1000
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi    906 AGGAGAACAAGTCTATCTTTTGTTAGGAGCGGCTAATCGAGACCCTAGCA    955

BSNT_04397___   1001 TATTCACGAACCCCGATGTCTTCGATATTACGAGAAGTCCTAATCCGCAC   1050
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU30190___bi    956 TATTCACGAACCCCGATGTCTTCGATATTACGAGAAGTCCTAATCCGCAT   1005

BSNT_04397___   1051 CTTTCATTCGGGCATGGCCATCATGTTTGCTTAGGGTCCTCGCTGGCACG   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi   1006 CTTTCATTCGGGCATGGCCATCATGTTTGCTTAGGGTCCTCGCTGGCACG   1055

BSNT_04397___   1101 ATTAGAAGCGCAAATTGCGATTAACACCTTTCTGCAGCGAATGCCCAGCC   1150
                     |||||||||||||||||||||||||||..|||||||||||||||||||||
BSU30190___bi   1056 ATTAGAAGCGCAAATTGCGATTAACACTCTTCTGCAGCGAATGCCCAGCC   1105

BSNT_04397___   1151 TTAAGCTCGCGGATTTTGAATGGCGGTATCGGCCGCTTTTTGGATTTCGG   1200
                     ||||.||.||||||||||||||||||||||||||||||||||||||||||
BSU30190___bi   1106 TTAATCTTGCGGATTTTGAATGGCGGTATCGGCCGCTTTTTGGATTTCGG   1155

BSNT_04397___   1201 GCGCTTGAGGAGCTGCCGGTGACTTTTGAATAA   1233
                     |||||||||||||||||||||||||||||||||
BSU30190___bi   1156 GCGCTTGAGGAGCTGCCGGTGACTTTTGAATAA   1188


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