Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04395 and BSU30170

See Amino acid alignment / Visit BSNT_04395 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:04
# Commandline: needle
#    -asequence dna-align/BSNT_04395___ytcP.1.22522.seq
#    -bsequence dna-align/BSU30170___ytcP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04395___ytcP-BSU30170___ytcP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04395___ytcP-BSU30170___ytcP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04395___ytcP
# 2: BSU30170___ytcP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 882
# Identity:     853/882 (96.7%)
# Similarity:   853/882 (96.7%)
# Gaps:          21/882 ( 2.4%)
# Score: 4233.0
# 
#
#=======================================

BSNT_04395___      1 GTGGGAGCTATCGCACATTCACTGAAAAACCGTCTGTTTGATATGTTGAT     50
                                          |||||||||||||||||||||||||||||
BSU30170___yt      1 ---------------------CTGAAAAACCGTCTGTTTGATATGTTGAT     29

BSNT_04395___     51 TTATGGTTTCTTGCTGATGTTCGCTTTAATATGCGTACTTCCGTTCATTC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt     30 TTATGGTTTCTTGCTGATGTTCGCTTTAATATGCGTACTTCCGTTCATTC     79

BSNT_04395___    101 ATGTCATCGCAGCATCTTTCGCCACAGTAGAAGAAGTCGTGTCGAAAACA    150
                     ||||.|||||||||||.||.||||||||||||||||||||||||||||.|
BSU30170___yt     80 ATGTTATCGCAGCATCCTTTGCCACAGTAGAAGAAGTCGTGTCGAAAAAA    129

BSNT_04395___    151 TTTATTTTAATACCGACCACTTTTTCGCTAGATGCTTATCGCTACATTTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    130 TTTATTTTAATACCGACCACTTTTTCGCTAGATGCTTATCGCTACATTTT    179

BSNT_04395___    201 TTCAACAGATATTATTTATAAGAGTTTGCTTGTTTCTGTGTTTGTGACAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    180 TTCAACAGATATTATTTATAAGAGTTTGCTTGTTTCTGTGTTTGTGACAG    229

BSNT_04395___    251 TGATAGGCACTGCGGTCAGCATGTTTCTTTCTTCACTGATGGCTTACGGG    300
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU30170___yt    230 TGATAGGCACTGCGGTCAGCATGTTTCTTTCGTCACTGATGGCTTACGGG    279

BSNT_04395___    301 TTATCCCGCCGTGATTTAATCGGCCGGCAGCCGCTCATGTTTCTCGTCGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    280 TTATCCCGCCGTGATTTAATCGGCCGGCAGCCGCTCATGTTTCTCGTCGT    329

BSNT_04395___    351 ATTTACGATGCTGTTTAGCGGCGGCATGATTCCGACTTTCCTTGTGGTCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    330 ATTTACGATGCTGTTTAGCGGCGGCATGATTCCGACTTTCCTTGTGGTCA    379

BSNT_04395___    401 AATCGCTTGGATTGCTCGATTCTTACTGGGCGCTTATTTTGCCGACAGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    380 AATCGCTTGGATTGCTCGATTCTTACTGGGCGCTTATTTTGCCGACAGCC    429

BSNT_04395___    451 ATTAATGCCTTTAACCTGATCATTCTGAAAAACTTCTTTCAAAATATCCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    430 ATTAATGCCTTTAACCTGATCATTCTGAAAAACTTCTTTCAAAATATCCC    479

BSNT_04395___    501 GTCAAGCCTGGAAGAGTCCGCGAAAATTGACGGGTGCAATGATCTGGGCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    480 GTCAAGCCTGGAAGAGTCCGCGAAAATTGACGGGTGCAATGATCTGGGCA    529

BSNT_04395___    551 TATTCTTTAAAATTGTGCTGCCGCTGTCTCTTCCTGCGATCGCAACGATT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    530 TATTCTTTAAAATTGTGCTGCCGCTGTCTCTTCCTGCGATCGCAACGATT    579

BSNT_04395___    601 TCACTATTTTATGCGGTCACGTATTGGAACACGTATATGACAGCGATCTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    580 TCACTATTTTATGCGGTCACGTATTGGAACACGTATATGACAGCGATCTT    629

BSNT_04395___    651 GTACTTAAACGATTCAGCAAAATGGCCGATTCAGGTGCTTCTGCGCCAAA    700
                     |||||||||.|||||||||||||||||.||||||||||||||||||||||
BSU30170___yt    630 GTACTTAAATGATTCAGCAAAATGGCCAATTCAGGTGCTTCTGCGCCAAA    679

BSNT_04395___    701 TCGTCATTGTATCAAGCGGTATGCAGGGGGATATGTCTGAAATGGGGTCG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    680 TCGTCATTGTATCAAGCGGTATGCAGGGGGATATGTCTGAAATGGGGTCG    729

BSNT_04395___    751 GGCAGCCCGCCGCCTGAGCAAACCATTAAAATGGCGGTCATAGTGGTGGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    730 GGCAGCCCGCCGCCTGAGCAAACCATTAAAATGGCGGTCATAGTGGTGGC    779

BSNT_04395___    801 GACCATCCCGGTTCTGCTTGTCTATCCGTTTATACAAAAGCATTTTGCAA    850
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU30170___yt    780 GACCATCCCTGTTCTGCTTGTCTATCCGTTTATACAAAAGCATTTTGCAA    829

BSNT_04395___    851 AAGGAGCTTTGCTGGGATCTGTCAAAGGATAA    882
                     ||||||||||||||||||||||||||||||||
BSU30170___yt    830 AAGGAGCTTTGCTGGGATCTGTCAAAGGATAA    861


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04395 and BSU30170

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
