Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04366 and BSU29950

See Amino acid alignment / Visit BSNT_04366 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_04366___ytlQ.1.22522.seq
#    -bsequence dna-align/BSU29950___ytlQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04366___ytlQ-BSU29950___ytlQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04366___ytlQ-BSU29950___ytlQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04366___ytlQ
# 2: BSU29950___ytlQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 915
# Identity:     909/915 (99.3%)
# Similarity:   909/915 (99.3%)
# Gaps:           0/915 ( 0.0%)
# Score: 4521.0
# 
#
#=======================================

BSNT_04366___      1 ATGGCACAAATCATCAAAATTCATGATTATATATCAAGATATGAGCTTGA     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU29950___yt      1 ATGGCACAAATCATCAAAATTCATGATTATATATCGAGATATGAGCTTGA     50

BSNT_04366___     51 TCCGTACCATTATATCAACCAGTTTGTACGTCTGAAAAAAGAGCGCTGGC    100
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU29950___yt     51 TCCGTACCATTATATCAACCAGTTTGTACGTTTGAAAAAAGAGCGCTGGC    100

BSNT_04366___    101 TTTCACTAGTAGAAGCAGCGGAACGACAGCATGAAGAAAGGCAAGCCAGT    150
                     ||||||||||||||||||||||.||.||||||||||||||||||||||||
BSU29950___yt    101 TTTCACTAGTAGAAGCAGCGGAGCGCCAGCATGAAGAAAGGCAAGCCAGT    150

BSNT_04366___    151 GCTGAAGAACCGGAACCGGTGCAGAAACGAAAAAAATTTTCATTGAAAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    151 GCTGAAGAACCGGAACCGGTGCAGAAACGAAAAAAATTTTCATTGAAAAG    200

BSNT_04366___    201 AAGAAAAGAAGAGATAAAAGCCGATATACAAGAAGAGAGACACCAATGGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    201 AAGAAAAGAAGAGATAAAAGCCGATATACAAGAAGAGAGACACCAATGGT    250

BSNT_04366___    251 TTGAGGACGAAGAAGATATTCATGTAAGGCTCCCGAAGAGCAGGGTGGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    251 TTGAGGACGAAGAAGATATTCATGTAAGGCTCCCGAAGAGCAGGGTGGCG    300

BSNT_04366___    301 CTTGCTTCTTTTTATAAAAGACATTTATATGATTTTCAGCTCAAATGGGC    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU29950___yt    301 CTTGCTTCTTTTTATAAAAGGCATTTATATGATTTTCAGCTCAAATGGGC    350

BSNT_04366___    351 AAGCTCTACTCTTTCAGAAATATCTCAACTCTCAAACCAGGTGAAGCAGG    400
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU29950___yt    351 AAGCTCTACTCTTTCAGAAATATCTCAACTCTCAAACCAAGTGAAGCAGG    400

BSNT_04366___    401 ACCGCATTTTGCGTTATCTGACCCAGCAGCTGCCTGATTCTTATTTTATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    401 ACCGCATTTTGCGTTATCTGACCCAGCAGCTGCCTGATTCTTATTTTATT    450

BSNT_04366___    451 ATGTATAAGCCTGTGCTGAAAATTCAGCAGGCGGCGGTTGAATTAAGCAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    451 ATGTATAAGCCTGTGCTGAAAATTCAGCAGGCGGCGGTTGAATTAAGCAT    500

BSNT_04366___    501 TGTGATTATTTCTCCTCTGGAAATTTATTGCGTTTCTTTTTTAGAGGCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    501 TGTGATTATTTCTCCTCTGGAAATTTATTGCGTTTCTTTTTTAGAGGCTG    550

BSNT_04366___    551 AGGAAGACAGTGTCTACATAGGGTCTAAAAATCGTTTTTGGGACAAGAAA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    551 AGGAAGACAGTGTCTACATAGGGTCTAAAAATCGTTTTTGGGACAAGAAA    600

BSNT_04366___    601 ACAGCCTCTCAGACTGCATCAGTGTTAAATCCAGGGCTTAGCCTGTTTCG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    601 ACAGCCTCTCAGACTGCATCAGTGTTAAATCCAGGGCTTAGCCTGTTTCG    650

BSNT_04366___    651 TACGGACTCGGTTGTGTCAAAGATCGTAAAGGAAAAACAGGCTGAGATTC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    651 TACGGACTCGGTTGTGTCAAAGATCGTAAAGGAAAAACAGGCTGAGATTC    700

BSNT_04366___    701 CGGTTCGAAAATTGCTTCTGAGCAGAACGTCGTACATCGATTACCCGGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    701 CGGTTCGAAAATTGCTTCTGAGCAGAACGTCGTACATCGATTACCCGGAG    750

BSNT_04366___    751 CCGCCATACGGCTTAGAAATAGCGGATAAGCGGAGCGCGGAAGAATGGAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    751 CCGCCATACGGCTTAGAAATAGCGGATAAGCGGAGCGCGGAAGAATGGAT    800

BSNT_04366___    801 TGAGCGGCAGAAGAAAAACACTGCTCCGATCAAACATCATCAGGTAAAGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    801 TGAGCGGCAGAAGAAAAACACTGCTCCGATCAAACATCATCAGGTAAAGG    850

BSNT_04366___    851 CTGCAAAGGCTCTATTGTCTTACTGCATGTCTGACTCCTATCGCAGACAG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29950___yt    851 CTGCAAAGGCTCTATTGTCTTACTGCATGTCTGACTCCTATCGCAGACAG    900

BSNT_04366___    901 GAGTGGCTGGAGTAA    915
                     |||||||||||||||
BSU29950___yt    901 GAGTGGCTGGAGTAA    915


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04366 and BSU29950

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
