Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04363 and BSU29930
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:00
# Commandline: needle
# -asequence dna-align/BSNT_04363___amyX.1.22522.seq
# -bsequence dna-align/BSU29930___amyX.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04363___amyX-BSU29930___amyX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04363___amyX-BSU29930___amyX.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04363___amyX
# 2: BSU29930___amyX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2157
# Identity: 2123/2157 (98.4%)
# Similarity: 2123/2157 (98.4%)
# Gaps: 0/2157 ( 0.0%)
# Score: 10479.0
#
#
#=======================================
BSNT_04363___ 1 ATGGTCAGCATCCGCCGCAGCTTCGAAGCGTATGTCGATGATATGAATAT 50
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU29930___am 1 ATGGTCAGCATCCGCCGCAGCTTCGAAGCGTATGTCGATGACATGAATAT 50
BSNT_04363___ 51 CATTACCGTTCTGATTCCTGCTGAACAAAAGGAAATCATGACACCGCCGT 100
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 51 CATTACTGTTCTGATTCCTGCTGAACAAAAGGAAATCATGACACCGCCGT 100
BSNT_04363___ 101 TTCGGCTTGAGACAGAAACAACAGATTTTCCTCTGGCTGTCAGGGAGGAA 150
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU29930___am 101 TTCGGCTTGAGACAGAAATAACAGATTTTCCTCTGGCTGTCAGGGAGGAA 150
BSNT_04363___ 151 TACTCCCTTGAAGCAAAATACAAGTACGTCTGCGTATCCGACCATCCTGT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 151 TACTCCCTTGAAGCAAAATACAAGTACGTCTGCGTATCCGACCATCCTGT 200
BSNT_04363___ 201 GACATTTGGAAAAATCCATTGCGTCAGAGCATCCAGCGGCCACAAAACGG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 201 GACATTTGGAAAAATCCATTGCGTCAGAGCATCCAGCGGCCACAAAACGG 250
BSNT_04363___ 251 ATCTCCAAATTGGCGCTGTCATCCGGACGTCTGCGTTTGATGACGAATTT 300
||||||||||||||||.||||||||||||.|.||||||||||||||||||
BSU29930___am 251 ATCTCCAAATTGGCGCGGTCATCCGGACGGCAGCGTTTGATGACGAATTT 300
BSNT_04363___ 301 TATTATGACGGAGAGCTGGGCGCCGTTTATACCGCGGATCATACCGTATT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 301 TATTATGACGGAGAGCTGGGCGCCGTTTATACCGCGGATCATACCGTATT 350
BSNT_04363___ 351 TAAAGTATGGGCGCCTGCTGCAACCTCAGCTGCTGTCAAGCTTTCACACC 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 351 TAAAGTATGGGCGCCTGCTGCAACCTCAGCTGCTGTCAAGCTTTCACACC 400
BSNT_04363___ 401 CCAATAAAAGCGGGTGCACATTCCAAATGACTCGGTTGGAAAAAGGCGTC 450
||||||||||||||.|||||||||||||||||||.|||||||||||||||
BSU29930___am 401 CCAATAAAAGCGGGCGCACATTCCAAATGACTCGCTTGGAAAAAGGCGTC 450
BSNT_04363___ 451 TATGCCGTTACGGTTACAGGTGACCTTCACGGATATGAGTATTTGTTTTG 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU29930___am 451 TATGCCGTTACGGTCACAGGTGACCTTCACGGATATGAGTATTTGTTTTG 500
BSNT_04363___ 501 CATCTGCAACAATTCAGAATGGATGGAAACAGTTGACCCGTATGCCAAGG 550
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU29930___am 501 CATCTGCAACAATTCAGAATGGATGGAAACAGTTGACCAGTATGCCAAGG 550
BSNT_04363___ 551 CTGTGACTGTAAATGGAGAGCTGGGCGTCGTCTTGCGCCCGGATCAAATG 600
||||||||||||||||||||..||||||||||||||||||||||||||||
BSU29930___am 551 CTGTGACTGTAAATGGAGAGAAGGGCGTCGTCTTGCGCCCGGATCAAATG 600
BSNT_04363___ 601 AAATGGACTGCTCCTCTTAAACCATTCTCACACCCTGTGGATGCCGTCAT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 601 AAATGGACTGCTCCTCTTAAACCATTCTCACACCCTGTGGATGCCGTCAT 650
BSNT_04363___ 651 CTATGAGACGCACCTTCGCGACTTCTCCATCCATGAAAACAGCGGCATGA 700
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU29930___am 651 CTATGAGACGCATCTTCGCGACTTCTCCATCCATGAAAACAGCGGCATGA 700
BSNT_04363___ 701 TAAACAAGGGAAAATACTTAGCATTAACGGAAACTGATACACAAACCGCA 750
||||||||||||||||||||||..|.||||||||||||||||||||||||
BSU29930___am 701 TAAACAAGGGAAAATACTTAGCGCTGACGGAAACTGATACACAAACCGCA 750
BSNT_04363___ 751 AATGGCAGTTCTTCGGGACTGGCGTATGTAAAAGAGCTTGGTGTTACACA 800
||||||||||||||||||.|.|||||||||||||||||||||||.|||||
BSU29930___am 751 AATGGCAGTTCTTCGGGATTAGCGTATGTAAAAGAGCTTGGTGTGACACA 800
BSNT_04363___ 801 TGTGGAGCTTCTGCCGGTGAATGATTTTGCCGGAGTTGATGAAGAGAAGC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 801 TGTGGAGCTTCTGCCGGTGAATGATTTTGCCGGAGTTGATGAAGAGAAGC 850
BSNT_04363___ 851 CGCTTGATGCATACAATTGGGGATATAACCCGCTTCATTTCTTTGCCCCG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 851 CGCTTGATGCATACAATTGGGGATATAACCCGCTTCATTTCTTTGCCCCG 900
BSNT_04363___ 901 GAGGGAAGCTATGCCTCAAACCCTCATGATCCTCAAACGAGAAAAACAGA 950
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU29930___am 901 GAGGGAAGCTATGCCTCAAATCCTCATGATCCTCAAACGAGAAAAACAGA 950
BSNT_04363___ 951 GCTGAAACAAATGATCAATACCCTGCATCAGCACGGTCTGCGAGTCATTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 951 GCTGAAACAAATGATCAATACCCTGCATCAGCACGGTCTGCGAGTCATTC 1000
BSNT_04363___ 1001 TGGATGTTGTTTTTAACCATGTGTATAAGAGGGAGAATTCCCCCTTTGAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1001 TGGATGTTGTTTTTAACCATGTGTATAAGAGGGAGAATTCCCCCTTTGAA 1050
BSNT_04363___ 1051 AAGACAGTGCCCGGTTATTTTTTCCGGCACGACGAATGTGGGATGCCGTC 1100
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU29930___am 1051 AAGACAGTGCCCGGTTATTTTTTCCGGCACGACGAATGTGGGATGCCATC 1100
BSNT_04363___ 1101 AAACGGCACCGGCGTTGGCAATGATATTGCATCAGAAAGAAGGATGGCAA 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1101 AAACGGCACCGGCGTTGGCAATGATATTGCATCAGAAAGAAGGATGGCAA 1150
BSNT_04363___ 1151 GAAAATTCATTGCGGATTGCGTGGTCTATTGGCTTGAAGAATACAATGCT 1200
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU29930___am 1151 GAAAATTCATTGCGGATTGCGTGGTCTATTGGCTTGAAGAATACAATGTT 1200
BSNT_04363___ 1201 GACGGCTTCCGATTTGATCTCCTCGGCATTTTAGATATTGACACCGTGCT 1250
|||||||||||.||||||||||||||.|||||||||||||||||||||||
BSU29930___am 1201 GACGGCTTCCGCTTTGATCTCCTCGGGATTTTAGATATTGACACCGTGCT 1250
BSNT_04363___ 1251 TTATATGAAAGAGAAAGCAACTAAGGCAAAGCCCGGAATCCTGCTTTTTG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1251 TTATATGAAAGAGAAAGCAACTAAGGCAAAGCCCGGAATCCTGCTTTTTG 1300
BSNT_04363___ 1301 GAGAAGGGTGGGATCTGGCTACACCGCTGCCGCATGAACAGAAAGCTGCT 1350
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU29930___am 1301 GAGAAGGGTGGGACCTGGCTACACCGCTGCCGCATGAACAGAAAGCTGCT 1350
BSNT_04363___ 1351 TTGGCGAACGCGCCAAGAATGCCGGGCATCGGCTTTTTTAATGATATGTT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1351 TTGGCGAACGCGCCAAGAATGCCGGGCATCGGCTTTTTTAATGATATGTT 1400
BSNT_04363___ 1401 TCGTGACGCTGTAAAAGGGAACACCTTTCACCTTAAGGCAGTAGGGTTTG 1450
||||||||||||||||||||||||||||||||||||||||..||||||||
BSU29930___am 1401 TCGTGACGCTGTAAAAGGGAACACCTTTCACCTTAAGGCAACAGGGTTTG 1450
BSNT_04363___ 1451 CGCTCGGCAGCGGTGAATCAGCACAAGCTGTGATGCATGGAATTGCCGGG 1500
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1451 CGCTCGGCAACGGTGAATCAGCACAAGCTGTGATGCATGGAATTGCCGGG 1500
BSNT_04363___ 1501 TCTTCCGGATGGAAGGCATTAGCGCCGATTGTTCCGGAACCAAGCCAGTC 1550
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU29930___am 1501 TCTTCCGGATGGAAGGCATTAGCACCGATTGTTCCGGAACCAAGCCAGTC 1550
BSNT_04363___ 1551 CATCAATTATGTCGAATCACACGACAATCACACCTTTTGGGATAAAATGA 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1551 CATCAATTATGTCGAATCACACGACAATCACACCTTTTGGGATAAAATGA 1600
BSNT_04363___ 1601 GCTTTGCGCTTCCTCAAGAAAATGACAGCCGAAAGCGAAGCAGGCAAAGG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1601 GCTTTGCGCTTCCTCAAGAAAATGACAGCCGAAAGCGAAGCAGGCAAAGG 1650
BSNT_04363___ 1651 CTTGCAGCCGCGATTATTTTGCTTGCCCAAGGGGTGCCGTTTATTCACAG 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1651 CTTGCAGCCGCGATTATTTTGCTTGCCCAAGGGGTGCCGTTTATTCACAG 1700
BSNT_04363___ 1701 CGGCCAGGAATTTTTCCGGACGAAGCAGGGAGTGGAAAACAGCTATCAAT 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1701 CGGCCAGGAATTTTTCCGGACGAAGCAGGGAGTGGAAAACAGCTATCAAT 1750
BSNT_04363___ 1751 CCAGTGACAGCATCAACCAGCTCGACTGGGATCGCCGTGAAACATTCAAA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1751 CCAGTGACAGCATCAACCAGCTCGACTGGGATCGCCGTGAAACATTCAAA 1800
BSNT_04363___ 1801 GAAGATGTTCACTATATCCGCAGGCTGATCTCGCTGAGAAAAGCGCATCC 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1801 GAAGATGTTCACTATATCCGCAGGCTGATCTCGCTGAGAAAAGCGCATCC 1850
BSNT_04363___ 1851 TGCATTCCGTCTTAGGTCCGCTGCAGACATCCGGCGCCATCTTGAATGCT 1900
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU29930___am 1851 TGCATTCCGTCTTAGGTCCGCTGCAGACATCCAGCGCCATCTTGAATGCT 1900
BSNT_04363___ 1901 TGACGCTAAAAGAACACCTTATCGCATACAGGCTTTATGATCTTGACGAG 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1901 TGACGCTAAAAGAACACCTTATCGCATACAGGCTTTATGATCTTGACGAG 1950
BSNT_04363___ 1951 GTTGACGAATGGAAAGATATCATTGTTATCCATCACGCGAGTCCAGACTC 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 1951 GTTGACGAATGGAAAGATATCATTGTTATCCATCACGCGAGTCCAGACTC 2000
BSNT_04363___ 2001 CGTCGAGTGGAGTCTGCCAAACGACATACCTTATCGGCTTTTATGTGATC 2050
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU29930___am 2001 CGTCGAGTGGAGGCTGCCAAACGACATACCTTATCGGCTTTTATGTGATC 2050
BSNT_04363___ 2051 CATCAGGATTTCAGGAAGACCCGGCAGAAATTAAGAAAACGGTTGCAGTA 2100
||||||||||||||||||||||..|||||||.||||||||||||||||||
BSU29930___am 2051 CATCAGGATTTCAGGAAGACCCAACAGAAATCAAGAAAACGGTTGCAGTA 2100
BSNT_04363___ 2101 AACGGCATCGGAACGGTTATCTTATATTTAGCATCAGATCTTAAGAGTTT 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29930___am 2101 AACGGCATCGGAACGGTTATCTTATATTTAGCATCAGATCTTAAGAGTTT 2150
BSNT_04363___ 2151 TGCTTGA 2157
|||||||
BSU29930___am 2151 TGCTTGA 2157
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