Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04346 and BSU29840

See Amino acid alignment / Visit BSNT_04346 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence dna-align/BSNT_04346___ytpP.1.22522.seq
#    -bsequence dna-align/BSU29840___ytpP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04346___ytpP-BSU29840___ytpP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04346___ytpP-BSU29840___ytpP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04346___ytpP
# 2: BSU29840___ytpP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 324
# Identity:     322/324 (99.4%)
# Similarity:   322/324 (99.4%)
# Gaps:           0/324 ( 0.0%)
# Score: 1602.0
# 
#
#=======================================

BSNT_04346___      1 ATGAAAAAAATTGAATCAACTCAAGAGCTGGAAAAAGCGGTAAAGGATGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29840___yt      1 ATGAAAAAAATTGAATCAACTCAAGAGCTGGAAAAAGCGGTAAAGGATGA     50

BSNT_04346___     51 TTGGTCTGTATTTATGTTTTCAGCCGATTGGTGCCCGGATTGCCGTTTTG    100
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU29840___yt     51 TTGGTCTGTATTTATGTTTTCGGCCGATTGGTGCCCGGATTGCCGTTTTG    100

BSNT_04346___    101 TAGAGCCTTTCCTGCCTGAATTGGAAGCGAATTTCCCTGAATTCACCTAC    150
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU29840___yt    101 TAGAGCCTTTCCTGCCTGAACTGGAAGCGAATTTCCCTGAATTCACCTAC    150

BSNT_04346___    151 TACTACGTAGACCGTGACAAATTCATTGATACATGTGCAGAGTGGGAAAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29840___yt    151 TACTACGTAGACCGTGACAAATTCATTGATACATGTGCAGAGTGGGAAAT    200

BSNT_04346___    201 TTACGGAATCCCAAGCTTTGTGGTGTTTAATGAAGGAAAAGAAGTAAATC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29840___yt    201 TTACGGAATCCCAAGCTTTGTGGTGTTTAATGAAGGAAAAGAAGTAAATC    250

BSNT_04346___    251 GTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAACAGTTTTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29840___yt    251 GTTTTGTGAGCAAAGACCGCAAAACAAAAGAAGAAATTGAACAGTTTTTA    300

BSNT_04346___    301 ACAGACTCTCTCGCTAAAGCGTAA    324
                     ||||||||||||||||||||||||
BSU29840___yt    301 ACAGACTCTCTCGCTAAAGCGTAA    324


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