Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04345 and BSU29830

See Amino acid alignment / Visit BSNT_04345 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:58
# Commandline: needle
#    -asequence dna-align/BSNT_04345___ytpQ.1.22522.seq
#    -bsequence dna-align/BSU29830___ytpQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04345___ytpQ-BSU29830___ytpQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04345___ytpQ-BSU29830___ytpQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04345___ytpQ
# 2: BSU29830___ytpQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 810
# Identity:     807/810 (99.6%)
# Similarity:   807/810 (99.6%)
# Gaps:           0/810 ( 0.0%)
# Score: 4023.0
# 
#
#=======================================

BSNT_04345___      1 TTGAAAATGACCTCAAGGAAGCTGTCAGATATACTGAAGCAGCGCCTTCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt      1 TTGAAAATGACCTCAAGGAAGCTGTCAGATATACTGAAGCAGCGCCTTCA     50

BSNT_04345___     51 GCACGAGAATCGCTCCTTTCTGTTTGACAGAGAAAAAGACACCCTCCGTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt     51 GCACGAGAATCGCTCCTTTCTGTTTGACAGAGAAAAAGACACCCTCCGTG    100

BSNT_04345___    101 TTGAGGATCAAACGACTAAAAAAGGGATTACACTCGATTTGCCGCCGATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    101 TTGAGGATCAAACGACTAAAAAAGGGATTACACTCGATTTGCCGCCGATT    150

BSNT_04345___    151 ATTGCAAAATGGGAACTGAAAAAAGACGAAGCCATTGATGAGATCGTGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    151 ATTGCAAAATGGGAACTGAAAAAAGACGAAGCCATTGATGAGATCGTGTA    200

BSNT_04345___    201 CTATGTCTCCGAAGCGATGACGGCAATGGAAGGGAAGGCTCAGGAAATGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    201 CTATGTCTCCGAAGCGATGACGGCAATGGAAGGGAAGGCTCAGGAAATGA    250

BSNT_04345___    251 CCGGGAAAGAAACTCGCATTTATCCGGTCATCCGCTCGACTTCCTTCCCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    251 CCGGGAAAGAAACTCGCATTTATCCGGTCATCCGCTCGACTTCCTTCCCG    300

BSNT_04345___    301 GACAAGTCCAGCGAAGATATCCCGCTCATTTATGACGATCATACCGCAGA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    301 GACAAGTCCAGCGAAGATATCCCGCTCATTTATGACGATCATACCGCAGA    350

BSNT_04345___    351 GACAAGAATTTATTACGCGCTAGATCTCGGGAAAACCTACCGTTTAATTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    351 GACAAGAATTTATTACGCGCTAGATCTCGGGAAAACCTACCGTTTAATTG    400

BSNT_04345___    401 ACCAGCGCATGCTTGAGAAAGAAAACTGGACAAAAGAGCGGATCAGAGAG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    401 ACCAGCGCATGCTTGAGAAAGAAAACTGGACAAAAGAGCGGATCAGAGAG    450

BSNT_04345___    451 ACGGCCGCATTTAATCTCCGTTCCCTGCCGACGGTTGTCAAAGAGGATAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    451 ACGGCCGCATTTAATCTCCGTTCCCTGCCGACGGTTGTCAAAGAGGATAC    500

BSNT_04345___    501 GGTTGCCGGCAATTACTTTTATTTCTTCAGGGCAAACGACGGATACGATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU29830___yt    501 GGTTGCCGGCAATTACTTTTATTTCTTCAGGGCAAACGACGGATACGACG    550

BSNT_04345___    551 CAAGCCGGATTTTGAACGAAGCGATCTTAAATGAGTATAAGCAGCATGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    551 CAAGCCGGATTTTGAACGAAGCGATCTTAAATGAGTATAAGCAGCATGCA    600

BSNT_04345___    601 GAAGGGGAGCTGGCGATCTCTGTTCCTCATCAGGACGTTTTGATTCTTGC    650
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    601 GAAGGTGAGCTGGCGATCTCTGTTCCTCATCAGGACGTTTTGATTCTTGC    650

BSNT_04345___    651 TGACATCCGGAATGAATCGGGGTATGATATTCTAGGACAAATGTCGATGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    651 TGACATCCGGAATGAATCGGGGTATGATATTCTAGGACAAATGTCGATGA    700

BSNT_04345___    701 GCTTCTTTGCAGGCGGCACCGTCCCGATTACCGCCCTTTCATTTTTGTAC    750
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU29830___yt    701 GCTTCTTTGCAGGCGGCACCGTCCCGATTACCGCCCTATCATTTTTGTAC    750

BSNT_04345___    751 AATGAAGGAAAGCTGGAACCGGTGTTTATCCTGGCGAAAAGCCGTCCGAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29830___yt    751 AATGAAGGAAAGCTGGAACCGGTGTTTATCCTGGCGAAAAGCCGTCCGAA    800

BSNT_04345___    801 AAAGGATTAG    810
                     ||||||||||
BSU29830___yt    801 AAAGGATTAG    810


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.