Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04343 and BSU29805
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Amino acid alignment /
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:58
# Commandline: needle
# -asequence dna-align/BSNT_04343.1.22522.seq
# -bsequence dna-align/BSU29805___ytpS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04343-BSU29805___ytpS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04343-BSU29805___ytpS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04343
# 2: BSU29805___ytpS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2859
# Identity: 2822/2859 (98.7%)
# Similarity: 2822/2859 (98.7%)
# Gaps: 9/2859 ( 0.3%)
# Score: 13984.0
#
#
#=======================================
BSNT_04343 1 ATGAGTTGGCTTCATAAATTTTTTGATTTGTTTTTAGGCGAAAGCGAAGA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1 ATGAGTTGGCTTCATAAATTTTTTGATTTGTTTTTAGGCGAAAGCGAAGA 50
BSNT_04343 51 GGATGCTGAACGGGAGACAAAACCCGCTCAAATTCCGCAGCAACAAGAAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 51 GGATGCTGAACGGGAGACAAAACCCGCTCAAATTCCGCAGCAACAAGAAG 100
BSNT_04343 101 TACATCATCCTGAAGGACAATTAAAAAGATTGGAAGATCCTAAAATATAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 101 TACATCATCCTGAAGGACAATTAAAAAGATTGGAAGATCCTAAAATATAT 150
BSNT_04343 151 TATGAATATCCAAAAGGCAAATTCCGTTTTCCAGTCGTGCCTGACGGATA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 151 TATGAATATCCAAAAGGCAAATTCCGTTTTCCAGTCGTGCCTGACGGATA 200
BSNT_04343 201 CAAAAATCATGACCTGAGAAGGCGCCGCACACCATCGGACGAACCGAAAT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 201 CAAAAATCATGACCTGAGAAGGCGCCGCACACCATCGGACGAACCGAAAT 250
BSNT_04343 251 CCGCGCCTCGTCCAAGTGCTGCACCTTACAGAGAGCGTCCCAGAAATGAA 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 251 CCGCGCCTCGTCCAAGTGCTGCACCTTACAGAGAGCGTCCCAGAAATGAA 300
BSNT_04343 301 GAAGAGCAGCATACATATCAAGCAGCAGAGCCGGCGAAGAAACCGTTTAA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 301 GAAGAGCAGCATACATATCAAGCAGCAGAGCCGGCGAAGAAACCGTTTAA 350
BSNT_04343 351 ACCGACAAATATCCCTTCGCCTATCTATGGATTCAATCAAAAACCATCTG 400
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU29805___yt 351 ACCGACAAATATCCCTTCGCCTGTCTATGGATTCAATCAAAAACCATCTG 400
BSNT_04343 401 TTAAAAAGGATGTGCCGAAAAAGCCTTCTGAAACATTGAACGAACCGGAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 401 TTAAAAAGGATGTGCCGAAAAAGCCTTCTGAAACATTGAACGAACCGGAT 450
BSNT_04343 451 AAATCGGTAAAAGAGAAGGTAACACTGCTGTCAGAAGAGATCGAACGTGA 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 451 AAATCGGTAAAAGAGAAGGTAACACTGCTGTCAGAAGAGATCGAACGTGA 500
BSNT_04343 501 ACGCGGCTATCCTGCTTCAGACACACCGGCGCATTCCAAAAAAGAAAGTC 550
||||||||||||||||||||||||||.||||||||||||||.||||||||
BSU29805___yt 501 ACGCGGCTATCCTGCTTCAGACACACAGGCGCATTCCAAAATAGAAAGTC 550
BSNT_04343 551 CTTTCTTCCCGGATACCCAATTTGAAAAACAGCCTTCTGGCGTTTTAAAC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 551 CTTTCTTCCCGGATACCCAATTTGAAAAACAGCCTTCTGGCGTTTTAAAC 600
BSNT_04343 601 AGAAAGGATATGGAGCATGATGAGGCGCTGGCGAAACGGCCAGCCGAGCC 650
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU29805___yt 601 AGAAAGGATACGGAGCATGATGAGGCGCTGGCGAAACGGCCAGCCGAGCC 650
BSNT_04343 651 GTCAGGTAACAAAGTGCCATTTGAGTCAGGCGTTCAACAGCCGGAAAAAG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 651 GTCAGGTAACAAAGTGCCATTTGAGTCAGGCGTTCAACAGCCGGAAAAAG 700
BSNT_04343 701 AGGAGCCTTTCTTCCCAGCTGAACAAGCCGAAGAGCAAACACCGCCTGAG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 701 AGGAGCCTTTCTTCCCAGCTGAACAAGCCGAAGAGCAAACACCGCCTGAG 750
BSNT_04343 751 ATGCTCACAGATACGGCGGCTGAAGGGCTTTCAGACAGTGAAGTAGGCCG 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 751 ATGCTCACAGATACGGCGGCTGAAGGGCTTTCAGACAGTGAAGTAGGCCG 800
BSNT_04343 801 CGAAGAGCCTGCAACGGCTGAGGAAGAACAAAGGGAGCAGCAGCCAGAGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 801 CGAAGAGCCTGCAACGGCTGAGGAAGAACAAAGGGAGCAGCAGCCAGAGA 850
BSNT_04343 851 AACTTGAAGAGCCTGTTTTCTCCGCTGAACTTGATGAAGAGCAAACAGCT 900
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 851 AATTTGAAGAGCCTGTTTTCTCCGCTGAACTTGATGAAGAGCAAACAGCT 900
BSNT_04343 901 CCTGAATCTCAGACAGAGGCAGTATCTGAGGATGAAAAAGCAAAAGAGCC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 901 CCTGAATCTCAGACAGAGGCAGTATCTGAGGATGAAAAAGCAAAAGAGCC 950
BSNT_04343 951 GTCAGACAGCCCAGTATACAATCACCATGAAAACGCGGCAGAAGGTGCTG 1000
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU29805___yt 951 GTCAGACAGCCCAGTATACAATCATCATGAAAACGCGGCAGAAGGTGCTG 1000
BSNT_04343 1001 AGTCCCCGTTCGTTCAAGAAGAACAAATGGACATTCGTCAGGAAGAGCCT 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1001 AGTCCCCGTTCGTTCAAGAAGAACAAATGGACATTCGTCAGGAAGAGCCT 1050
BSNT_04343 1051 TTATTTACTGATCATGAGTATTCATCAGAGGCTCTGGCTCAAGCAGAAAC 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1051 TTATTTACTGATCATGAGTATTCATCAGAGGCTCTGGCTCAAGCAGAAAC 1100
BSNT_04343 1101 TGTGGCAAAAGAATCAGAAGAGCC---------CATAATAAATAATCATT 1141
|||||||||||||||||||||||| |||||||||||||||||
BSU29805___yt 1101 TGTGGCAAAAGAATCAGAAGAGCCATCAGAAAGCATAATAAATAATCATT 1150
BSNT_04343 1142 ATGACATCCTGGGAGAGGCTCAGGAAACGAAGATAGATGTTCAGCCAGAC 1191
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1151 ATGACACCCTGGGAGAGGCTCAGGAAACGAAGATAGATGTTCAGCCAGAC 1200
BSNT_04343 1192 AGCCATACAGAGCTTGAGAAAACTGAACACATGGAGCAGGGTTCCAAATC 1241
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1201 AGCCATACAGAGCTTGAGAAAACTGAACACATGGAGCAGGGTTCCAAATC 1250
BSNT_04343 1242 GTCTACTGCACCTCTTGAAAATCGGCAGGGAATTCGCGCAGACAAACCTC 1291
||||||||||.||||||||||.|||||||.||||||||||||||||||||
BSU29805___yt 1251 GTCTACTGCAACTCTTGAAAACCGGCAGGAAATTCGCGCAGACAAACCTC 1300
BSNT_04343 1292 GCGAAGCTTCAGCAGAGCCGAAAAAAAGGCCTGGTGCACAGGAGAAAAGG 1341
||||||||||||.|||||||||||||||||||||||.|||||||||||||
BSU29805___yt 1301 GCGAAGCTTCAGAAGAGCCGAAAAAAAGGCCTGGTGTACAGGAGAAAAGG 1350
BSNT_04343 1342 ACCGAACAAAGCGCATCTTCTCAAAAAGGGCCATCCGTTCCTTTTAATGT 1391
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1351 ACTGAACAAAGCGCATCTTCTCAAAAAGGGCCATCCGTTCCTTTTAATGT 1400
BSNT_04343 1392 GATGATGCTGAAAAGAGATACGCATAAACAGCAAAAAGCAGAGGAGCGCC 1441
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1401 GATGATGCTGAAAAGAGATACGCATAAACAGCAAAAAGCAGAGGAGCGCC 1450
BSNT_04343 1442 GCGGCAGCTATGTATTTCCGAATGTTGCACTGCTTGATGTCCCGCCAGCG 1491
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1451 GCGGCAGCTATGTATTTCCGAATGTTGCACTGCTTGATGTCCCGCCAGCG 1500
BSNT_04343 1492 CAGGTTCAAGATGATACTGCGTGGATCGAAGAACAGCGTCAGCTTCTTGA 1541
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1501 CAGGTTCAAGATGATACTGCGTGGATCGAAGAACAGCGTCAGCTTCTTGA 1550
BSNT_04343 1542 TTTGACCTTGAAAAACTTCAATGTCCGCGCCAATGTGGTCCATGTAACCC 1591
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU29805___yt 1551 TTTGACCTTGAAAAATTTCAATGTCCGCGCCAATGTGGTCCATGTAACCC 1600
BSNT_04343 1592 AGGGTCCGTCTGTCACGAGATTTGAAGTGCATCCTGAACCGGGTGTAAAG 1641
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1601 AGGGTCCGTCTGTCACGAGATTTGAAGTGCATCCTGAACCGGGTGTAAAG 1650
BSNT_04343 1642 GTGAATAAAATCACCAACTTGTCCGATGATATTAAACTCAGTCTCTCAGC 1691
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1651 GTGAATAAAATCACCAACTTGTCCGATGATATTAAACTCAGTCTCTCAGC 1700
BSNT_04343 1692 GAGAGATATTCGGATTGAAGCGCCGATTCCGGGGAAAAACACGATCGGAA 1741
.|.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1701 TAAAGATATTCGGATTGAAGCGCCGATTCCGGGGAAAAACACGATCGGAA 1750
BSNT_04343 1742 TTGAAGTGCCGAACCGCACGAGCAAGGTGGTTGATTTGCGCCAAATGATT 1791
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1751 TTGAAGTGCCGAACCGCACGAGCAAGGTGGTTGATTTGCGCCAAATGATT 1800
BSNT_04343 1792 CGCAGCTCAGCTTTCAGGACAAGCAAGTCACCGCTCACAGCTGCGCTGGG 1841
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1801 CGCAGCTCAGCTTTCAGGACAAGCAAGTCACCGCTCACAGCTGCGCTGGG 1850
BSNT_04343 1842 ATTAGATATTTCAGGAAATCCTGTTGTTATCGACTTGAAGAAAATGCCGC 1891
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU29805___yt 1851 ATTAGATATTTCGGGAAATCCTGTTGTTATCGACTTGAAGAAAATGCCGC 1900
BSNT_04343 1892 ATGGCTTGATTGCCGGCGCTACAGGCTCCGGAAAAAGCGTATGCATCAAT 1941
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1901 ATGGCTTGATTGCCGGCGCTACAGGCTCCGGAAAAAGCGTATGCATCAAT 1950
BSNT_04343 1942 ACAATATTAGTCAGCCTGCTTTATAAAGCTGACCCGAGTGAGGTAAAGGT 1991
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU29805___yt 1951 ACAATATTAGTAAGCCTGCTTTATAAAGCTGACCCGAGTGAGGTAAAGGT 2000
BSNT_04343 1992 GCTGCTGATTGATCCGAAAATGGTAGAGCTGGCCCCTTACAATAAAATTC 2041
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2001 GCTGCTGATTGATCCGAAAATGGTAGAGCTGGCCCCTTACAATAAAATTC 2050
BSNT_04343 2042 CTCACCTCGTCAGCCCAGTCATTACTGATGCTAAAGCGGCTACAGCTGCT 2091
||||||||||||||||.||||||||||||||||||||||||||.||||||
BSU29805___yt 2051 CTCACCTCGTCAGCCCGGTCATTACTGATGCTAAAGCGGCTACGGCTGCT 2100
BSNT_04343 2092 TTGAAATGGGTCGTTGAGGAAATGGAGCGCCGCTATGAGCTTTTTGCCCA 2141
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2101 TTGAAATGGGTCGTTGAGGAAATGGAGCGCCGCTATGAGCTTTTTGCCCA 2150
BSNT_04343 2142 TTCCGGTGTCCGCGACATTGACCGCTTTAATCAATTAACCGCTGAACACC 2191
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2151 TTCAGGTGTCCGCGACATTGACCGCTTTAATCAATTAACCGCTGAACACC 2200
BSNT_04343 2192 AAATGGGTGAAAAGCTGCCATATTTAGTTGTCATTATTGATGAGCTTGCA 2241
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU29805___yt 2201 AAATGGGTGAAAAGCTGCCGTATTTAGTTGTCATTATTGATGAGCTTGCA 2250
BSNT_04343 2242 GATTTGATGATGGTGGCTCCAAACGATGTGGAAGAAAGCATTGCGCGGAT 2291
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2251 GATTTGATGATGGTGGCTCCAAACGATGTGGAAGAAAGCATTGCGCGGAT 2300
BSNT_04343 2292 CGCCCAAAAAGCCAGAGCGTGCGGTATCCATCTTCTCGTTGCAACTCAGC 2341
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU29805___yt 2301 CGCCCAAAAAGCCAGAGCGTGCGGTATCCATCTTCTCGTCGCAACTCAGC 2350
BSNT_04343 2342 GTCCGTCAGTCGATGTCATTACAGGTCTGATTAAGGCGAATATCCCAACG 2391
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2351 GTCCGTCAGTCGATGTCATTACAGGTCTGATTAAGGCGAATATCCCAACG 2400
BSNT_04343 2392 AGAATCGCCTTTTCTGTCTCAAGCCAGGTTGATTCCCGAACAATTATTGA 2441
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2401 AGAATCGCCTTTTCTGTCTCAAGCCAGGTTGATTCCCGAACAATTATTGA 2450
BSNT_04343 2442 CATAGCCGGTGCAGAAAAGCTTCTCGGAAAAGGGGATATGCTCTTTTTGG 2491
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2451 TATAGCCGGTGCAGAAAAGCTTCTCGGAAAAGGGGATATGCTCTTTTTGG 2500
BSNT_04343 2492 AAAACGGATCGGGAAAACCTGTCCGTCTGCAAGGTAACTTTGTGTCAGAC 2541
|||||||.|||||||||||.||.|||||||||||||||||||||||||||
BSU29805___yt 2501 AAAACGGCTCGGGAAAACCGGTTCGTCTGCAAGGTAACTTTGTGTCAGAC 2550
BSNT_04343 2542 CGGGAAATCGACCGCGTCGTTTCTCACGTCAGAAGCCAAATGCCGCCGAC 2591
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU29805___yt 2551 CGGGAAATCGACCGCGTCGTTTCCCACGTCAGAAGCCAAATGCCGCCGAC 2600
BSNT_04343 2592 CTATTTATTTGAACAAGAAGAGCTCGTAAGACAAGGATCTGCCCTGAAAG 2641
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2601 CTATTTATTTGAACAAGAAGAGCTCGTAAGACAAGGATCTGCCCTGAAAG 2650
BSNT_04343 2642 AAGAGGACGAACTGTTTTACGAAGCGTGTGAGTTTGTTGTAGAGCAAAAC 2691
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2651 AAGAGGACGAACTGTTTTACGAAGCGTGTGAGTTTGTTGTAGAGCAAAAC 2700
BSNT_04343 2692 AGTGCGAGCACTTCAAGCCTGCAAAGAAGATTCAGAATCGGTTACAATCG 2741
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2701 AGTGCGAGCACTTCAAGCCTGCAAAGAAGATTCAGAATCGGTTACAATCG 2750
BSNT_04343 2742 TGCGGCAAGGCTGATCGACATGATGGAAGCGGAAGGCATGATCTCTGAGG 2791
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2751 TGCGGCAAGGCTGATCGACATGATGGAAGCGGAAGGCATGATCTCTGAGG 2800
BSNT_04343 2792 CAAAAGGAAGCAAGCCTCGAGAGGTGCTGATCACAGCAAGTGATTTAATA 2841
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29805___yt 2801 CAAAAGGAAGCAAGCCTCGAGAGGTGCTGATCACAGCAAGTGATTTAATA 2850
BSNT_04343 2842 AACGAATAA 2850
|||||||||
BSU29805___yt 2851 AACGAATAA 2859
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