Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04331 and BSU29740

See Amino acid alignment / Visit BSNT_04331 in genome browser / Return to Orthologue table 
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence dna-align/BSNT_04331___ccpA.1.22522.seq
#    -bsequence dna-align/BSU29740___ccpA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04331___ccpA-BSU29740___ccpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04331___ccpA-BSU29740___ccpA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04331___ccpA
# 2: BSU29740___ccpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity:    1004/1005 (99.9%)
# Similarity:  1004/1005 (99.9%)
# Gaps:           0/1005 ( 0.0%)
# Score: 5016.0
# 
#
#=======================================

BSNT_04331___      1 ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc      1 ATGAGCAATATTACGATCTACGATGTAGCGAGAGAAGCTAATGTAAGCAT     50

BSNT_04331___     51 GGCAACCGTTTCCCGTGTCGTGAACGGCAACCCGAATGTAAAACCGACAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc     51 GGCAACCGTTTCCCGTGTCGTGAACGGCAACCCGAATGTAAAACCGACAA    100

BSNT_04331___    101 CGAGAAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAAC    150
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    101 CGAGGAAAAAAGTCTTGGAAGCCATTGAACGTCTCGGTTACCGTCCAAAC    150

BSNT_04331___    151 GCGGTGGCAAGAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    151 GCGGTGGCAAGAGGGCTGGCAAGTAAAAAAACAACAACTGTAGGTGTCAT    200

BSNT_04331___    201 CATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCGCGCGGAATTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    201 CATTCCCGATATCTCAAGCATTTTCTATTCAGAGCTTGCGCGCGGAATTG    250

BSNT_04331___    251 AAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    251 AAGATATCGCGACAATGTATAAATACAATATTATTTTGAGCAACTCTGAC    300

BSNT_04331___    301 CAAAACATGGAGAAAGAGCTGCACTTGTTAAACACAATGCTCGGCAAACA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    301 CAAAACATGGAGAAAGAGCTGCACTTGTTAAACACAATGCTCGGCAAACA    350

BSNT_04331___    351 AGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    351 AGTGGACGGCATCGTGTTTATGGGCGGAAACATTACGGACGAGCATGTGG    400

BSNT_04331___    401 CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    401 CGGAATTTAAGCGTTCTCCAGTGCCGATTGTACTTGCCGCTTCTGTAGAA    450

BSNT_04331___    451 GAGCAGGAGGAAACACCGTCAGTCGCTATCGATTACGAACAGGCGATTTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    451 GAGCAGGAGGAAACACCGTCAGTCGCTATCGATTACGAACAGGCGATTTA    500

BSNT_04331___    501 TGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    501 TGATGCCGTGAAGCTTTTGGTTGATAAAGGACATACAGACATCGCGTTCG    550

BSNT_04331___    551 TTTCCGGACCAATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    551 TTTCCGGACCAATGGCAGAACCGATCAACCGTTCGAAAAAACTCCAAGGC    600

BSNT_04331___    601 TACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATGAACAATTTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    601 TACAAACGTGCGCTTGAAGAAGCGAACCTTCCGTTTAATGAACAATTTGT    650

BSNT_04331___    651 AGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    651 AGCTGAAGGGGATTACACATATGATTCCGGACTCGAAGCACTGCAGCATC    700

BSNT_04331___    701 TGATGAGCCTGGATAAAAAACCGACAGCCATTCTTTCTGCAACTGATGAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    701 TGATGAGCCTGGATAAAAAACCGACAGCCATTCTTTCTGCAACTGATGAA    750

BSNT_04331___    751 ATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    751 ATGGCACTCGGCATTATCCATGCCGCTCAGGATCAGGGCTTATCCATTCC    800

BSNT_04331___    801 GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    801 GGAGGATCTCGACATTATCGGTTTTGATAATACAAGATTAAGCCTCATGG    850

BSNT_04331___    851 TTCGTCCTCAGCTTTCAACAGTTGTTCAGCCGACATATGATATCGGCGCC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    851 TTCGTCCTCAGCTTTCAACAGTTGTTCAGCCGACATATGATATCGGCGCC    900

BSNT_04331___    901 GTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    901 GTTGCGATGAGACTGCTGACGAAGCTCATGAATAAAGAGCCGGTTGAAGA    950

BSNT_04331___    951 GCATATCGTCGAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29740___cc    951 GCATATCGTCGAACTGCCGCACCGTATAGAGCTTAGAAAGTCAACCAAGT   1000

BSNT_04331___   1001 CATAA   1005
                     |||||
BSU29740___cc   1001 CATAA   1005


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