Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_04330 and BSU29730

See Amino acid alignment / Visit BSNT_04330 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:56
# Commandline: needle
#    -asequence dna-align/BSNT_04330___motP.1.22522.seq
#    -bsequence dna-align/BSU29730___ytxD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04330___motP-BSU29730___ytxD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04330___motP-BSU29730___ytxD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04330___motP
# 2: BSU29730___ytxD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 843
# Identity:     819/843 (97.2%)
# Similarity:   819/843 (97.2%)
# Gaps:          24/843 ( 2.8%)
# Score: 4095.0
# 
#
#=======================================

BSNT_04330___      1 TTGCTTTTTTCATGGGGAGAAATGATGAAACGTTTTGATTATCTTACACC     50
                                             ||||||||||||||||||||||||||
BSU29730___yt      1 ------------------------ATGAAACGTTTTGATTATCTTACACC     26

BSNT_04330___     51 TGTTGGATTTGTGTTAGGAACGATTATTATTGTTATCGGGATTATTTCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt     27 TGTTGGATTTGTGTTAGGAACGATTATTATTGTTATCGGGATTATTTCAG     76

BSNT_04330___    101 GATCGGGAGTAAGCGGTTTCCGCTCTTTTCTTGATCTGACCTCTTTCTTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt     77 GATCGGGAGTAAGCGGTTTCCGCTCTTTTCTTGATCTGACCTCTTTCTTC    126

BSNT_04330___    151 ATCGTAACAGGGGGACTTTGCGCCGCTGTTTTTATCAGTTTTCCGCCAAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    127 ATCGTAACAGGGGGACTTTGCGCCGCTGTTTTTATCAGTTTTCCGCCAAG    176

BSNT_04330___    201 TGAGCTGAAAAAAGCGCCCTCTGTGTTAAAGCAGGCATTCATCCGCCAGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    177 TGAGCTGAAAAAAGCGCCCTCTGTGTTAAAGCAGGCATTCATCCGCCAGG    226

BSNT_04330___    251 AAGACAATGTGAAAGATCTTGTGAAAACCTTTGTTTCCCTTTCCGATCAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    227 AAGACAATGTGAAAGATCTTGTGAAAACCTTTGTTTCCCTTTCCGATCAC    276

BSNT_04330___    301 GCGCGAAAACACGGGCTTTTATCATTGGATGATCAGGCTCGGGAAATCAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    277 GCGCGAAAACACGGGCTTTTATCATTGGATGATCAGGCTCGGGAAATCAA    326

BSNT_04330___    351 AGATCCATTCTTGAAAAAAGGGCTGCTTTTAGCGATTGACGGCTGGGATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    327 AGATCCATTCTTGAAAAAAGGGCTGCTTTTAGCGATTGACGGCTGGGATG    376

BSNT_04330___    401 AAGAAACGATTCGGCTCGTCATGGATTCAGAAATCGCAGCAATGGAGGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    377 AAGAAACGATTCGGCTCGTCATGGATTCAGAAATCGCAGCAATGGAGGAA    426

BSNT_04330___    451 CGGCACCGAAAAGGGCGGCGAGTTTTTGAAAAAGCGGGAGAATTCGCTCC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    427 CGGCACCGAAAAGGGCGGCGAGTTTTTGAAAAAGCGGGAGAATTCGCTCC    476

BSNT_04330___    501 GGCATGGGGAATGATCGGAACACTCGTCGGGCTTGTGCTGATGCTCAAAA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    477 GGCATGGGGAATGATCGGAACACTCGTCGGGCTTGTGCTGATGCTCAAAA    526

BSNT_04330___    551 ACTTAAACGACCCGCATATGCTCGGACCAAACATGGCCATTGCGCTTCTG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    527 ACTTAAACGACCCGCATATGCTCGGACCAAACATGGCCATTGCGCTTCTG    576

BSNT_04330___    601 ACGACTTTATATGGTTCATTACTGGCAAATATGGTCTTCAACCCGATCGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    577 ACGACTTTATATGGTTCATTACTGGCAAATATGGTCTTCAACCCGATCGC    626

BSNT_04330___    651 GGCTAAGCTTGAAGAGAAAACAGAAAGTGAAATTTTCATCAAGCAGGTAA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    627 GGCTAAGCTTGAAGAGAAAACAGAAAGTGAAATTTTCATCAAGCAGGTAA    676

BSNT_04330___    701 TGGTGGAAGGGATTATCGGTGTTCAATCCGGAAAAAACCCGCGCAACCTT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    677 TGGTGGAAGGGATTATCGGTGTTCAATCCGGAAAAAACCCGCGCAACCTT    726

BSNT_04330___    751 GAAAGCCAGCTGGTCGTTTTCAGCTCACGGGAAGAATGGCAGAAGCAGCC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    727 GAAAGCCAGCTGGTCGTTTTCAGCTCACGGGAAGAATGGCAGAAGCAGCC    776

BSNT_04330___    801 AAAACAAGTAAAAACAAAAAAGGGATCTGTACATGAAGCTTAG    843
                     |||||||||||||||||||||||||||||||||||||||||||
BSU29730___yt    777 AAAACAAGTAAAAACAAAAAAGGGATCTGTACATGAAGCTTAG    819


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.