Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04319 and BSU29660

See Amino acid alignment / Visit BSNT_04319 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence dna-align/BSNT_04319___rpsD.1.22522.seq
#    -bsequence dna-align/BSU29660___rpsD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04319___rpsD-BSU29660___rpsD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04319___rpsD-BSU29660___rpsD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04319___rpsD
# 2: BSU29660___rpsD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 603
# Identity:     603/603 (100.0%)
# Similarity:   603/603 (100.0%)
# Gaps:           0/603 ( 0.0%)
# Score: 3015.0
# 
#
#=======================================

BSNT_04319___      1 ATGGCTCGCTATACAGGTCCATCTTGGAAACTGTCCCGCCGTCTAGGAAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp      1 ATGGCTCGCTATACAGGTCCATCTTGGAAACTGTCCCGCCGTCTAGGAAT     50

BSNT_04319___     51 CTCTCTTAGCGGTACAGGAAAAGAATTAGAAAAACGCCCTTACGCTCCAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp     51 CTCTCTTAGCGGTACAGGAAAAGAATTAGAAAAACGCCCTTACGCTCCAG    100

BSNT_04319___    101 GTCCACACGGCCCAGGACAACGTAAAAAATTATCAGAATACGGTTTGCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    101 GTCCACACGGCCCAGGACAACGTAAAAAATTATCAGAATACGGTTTGCAA    150

BSNT_04319___    151 TTGCAAGAAAAGCAAAAGCTTCGTCACATGTACGGTGTAAACGAACGTCA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    151 TTGCAAGAAAAGCAAAAGCTTCGTCACATGTACGGTGTAAACGAACGTCA    200

BSNT_04319___    201 ATTCCGCACTTTGTTTGACAAAGCTGGCAAACTAGCTGGTAAACACGGTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    201 ATTCCGCACTTTGTTTGACAAAGCTGGCAAACTAGCTGGTAAACACGGTG    250

BSNT_04319___    251 AAAACTTCATGATTCTTTTAGATTCTCGTCTTGATAACGTTGTGTACAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    251 AAAACTTCATGATTCTTTTAGATTCTCGTCTTGATAACGTTGTGTACAAG    300

BSNT_04319___    301 CTAGGTTTAGCACGTACTCGCCGTCAAGCTCGCCAATTGGTTAACCACGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    301 CTAGGTTTAGCACGTACTCGCCGTCAAGCTCGCCAATTGGTTAACCACGG    350

BSNT_04319___    351 TCACATTCTTGTAGACGGAAGCCGCGTTGACATCCCGTCTTACCTAGTGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    351 TCACATTCTTGTAGACGGAAGCCGCGTTGACATCCCGTCTTACCTAGTGA    400

BSNT_04319___    401 AACCTGGTCAAACAATCGGTGTTCGCGAAAAATCAAGAAACCTTTCTATC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    401 AACCTGGTCAAACAATCGGTGTTCGCGAAAAATCAAGAAACCTTTCTATC    450

BSNT_04319___    451 ATCAAAGAATCTGTTGAAGTGAACAACTTCGTTCCTGAATACCTTACTTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    451 ATCAAAGAATCTGTTGAAGTGAACAACTTCGTTCCTGAATACCTTACTTT    500

BSNT_04319___    501 CGACGCTGAAAAGCTTGAAGGTACTTTCACTCGTCTTCCTGAGCGTTCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    501 CGACGCTGAAAAGCTTGAAGGTACTTTCACTCGTCTTCCTGAGCGTTCTG    550

BSNT_04319___    551 AACTTGCTCCGGAAATTAACGAAGCGCTTATCGTTGAGTTCTACTCTCGT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29660___rp    551 AACTTGCTCCGGAAATTAACGAAGCGCTTATCGTTGAGTTCTACTCTCGT    600

BSNT_04319___    601 TAA    603
                     |||
BSU29660___rp    601 TAA    603


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