Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04317 and BSU29650
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:54
# Commandline: needle
# -asequence dna-align/BSNT_04317___ytrP.1.22522.seq
# -bsequence dna-align/BSU29650___ytrP.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04317___ytrP-BSU29650___ytrP.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04317___ytrP-BSU29650___ytrP.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04317___ytrP
# 2: BSU29650___ytrP
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1740
# Identity: 1720/1740 (98.9%)
# Similarity: 1720/1740 (98.9%)
# Gaps: 0/1740 ( 0.0%)
# Score: 8520.0
#
#
#=======================================
BSNT_04317___ 1 ATGGTAGAACAAACTAAAGATCAATTATCCGCCTTTCATTATCATATGCT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1 ATGGTAGAACAAACTAAAGATCAATTATCCGCCTTTCATTATCATATGCT 50
BSNT_04317___ 51 TGATTTTTTATTAACCAAATCTGAAAAAGTCACATTCACCGACTCTTTCA 100
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 51 CGATTTTTTATTAACCAAATCTGAAAAAGTCACATTCACCGACTCTTTCA 100
BSNT_04317___ 101 TATGGCTGACTTCGGCTATTCAAACCTATTTTTCAACCCTTTGTGTTTCG 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 101 TATGGCTGACTTCGGCTATTCAAACCTATTTTTCAACCCTTTGTGTTTCG 150
BSNT_04317___ 151 CTTACACCGTCATCATCAGACTTTGTGACAAAACAGGCAGATGGAGAAGC 200
||||||||||||.|||||||||||||||||||||.|||||||||.|||||
BSU29650___yt 151 CTTACACCGTCACCATCAGACTTTGTGACAAAACTGGCAGATGGTGAAGC 200
BSNT_04317___ 201 GCGTTTTTCCGCTTCAAAAATAAACGCTTCATGTTACCTGATTGAGGACG 250
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU29650___yt 201 GCGTTTTTCCGCTTCAAAAATAAACGCTTCATGTTATCTGATTGAGGACG 250
BSNT_04317___ 251 GCTCCGGCAGGTGTTTCCATCTTGCGTGCAGGCAGGATGAAGAGATTCCT 300
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU29650___yt 251 GCTCCGGCAGGCGTTTCCATCTTGCGTGCAGGCAGGATGAAGAGATTCCT 300
BSNT_04317___ 301 GAAGGGCTTCCGGACGTGGTTGCTTCGTTTTTAAACCAGTCGATGAAACA 350
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU29650___yt 301 GAAGGGCTTCCGGACGTGGTTGCTTCATTTTTAAACCAGTCGATGAAACA 350
BSNT_04317___ 351 GGAAAGACTCTATAATAAAACGATCTACCAAAAAAAGATATACAAAATGA 400
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU29650___yt 351 GGAAAGACTCTATAACAAAACGATCTACCAAAAAAAGATATACAAAATGA 400
BSNT_04317___ 401 CGGAGCTGTTCCATTCACTGCTTGATCAGACAGATGTGCTGAAGCAGCTT 450
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 401 CAGAGCTGTTCCATTCACTGCTTGATCAGACAGATGTGCTGAAGCAGCTT 450
BSNT_04317___ 451 TTAGAAAGCTTGACCAGCACATTTTCTCTTTTTGAGTTTTCTTTATTTAT 500
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU29650___yt 451 TTAGAAAGCTTGACAAGCACATTTTCTCTTTTTGAGTTTTCTTTATTTAT 500
BSNT_04317___ 501 ATCGCACGATCAAGACCAATGTTTAGGGATTCCTGCAAAAGAGCTGTATA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 501 ATCGCACGATCAAGACCAATGTTTAGGGATTCCTGCAAAAGAGCTGTATA 550
BSNT_04317___ 551 TGGAAGGGGAAAAATCCGATTCCTTTGCGCTCAAAGTGTATTTGTCCGGA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 551 TGGAAGGGGAAAAATCCGATTCCTTTGCGCTCAAAGTGTATTTGTCCGGA 600
BSNT_04317___ 601 GACATTTTGCGGAAAAATGAATCTGCCGCCTATATTCCGATCAAAGGACA 650
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU29650___yt 601 GACATTTTGCGGAAAAATGAATCTGTCGCCTATATTCCGATCAAAGGACA 650
BSNT_04317___ 651 GCAGGGCACATACGGGGTGTTGAAGGCTGAAGGAACGGGTGACAGCTTTC 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 651 GCAGGGCACATACGGGGTGTTGAAGGCTGAAGGAACGGGTGACAGCTTTC 700
BSNT_04317___ 701 TTGCTGATGCCTGCCTTGATGAAATGTCGATGTTAGCAAACGCCGCGGGA 750
||.||||||||||||||||||||||||||.||||||||||||||||||||
BSU29650___yt 701 TTACTGATGCCTGCCTTGATGAAATGTCGCTGTTAGCAAACGCCGCGGGA 750
BSNT_04317___ 751 AAAGCGTTTGAAAATGCCCAGCTCTACGAACAATCCAAAGCAAGCATCGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 751 AAAGCGTTTGAAAATGCCCAGCTCTACGAACAATCCAAAGCAAGCATCGC 800
BSNT_04317___ 801 AAATTTGGAATTGATTAATGAAACATCACGACGCCTGAATCAGCGGCTGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 801 AAATTTGGAATTGATTAATGAAACATCACGACGCCTGAATCAGCGGCTGA 850
BSNT_04317___ 851 CATTGACTGATACAATGAATGATCTGGCTGTGAGAATGGCAGAATCGTTT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 851 CATTGACTGATACAATGAATGATCTGGCTGTGAGAATGGCAGAATCGTTT 900
BSNT_04317___ 901 CAGGCAGAAGAAGTGGGATTTTTTCATATAGACCATTTTGAAAACCTAAC 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 901 CAGGCAGAAGAAGTGGGATTTTTTCATATAGACCATTTTGAAAACCTAAC 950
BSNT_04317___ 951 ATTGCTCCCAGGCAGCACAGCATTTTTTAAAGAAGCGAAGCAGTCAGATT 1000
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU29650___yt 951 ATTGCTCCCAGGCAGCACAGCATTTTTTAAAGAAGCGAAGCCGTCAGATT 1000
BSNT_04317___ 1001 TTTATAATGAGCTGAAAGAAAAGCTGTATGAAGGTGAAAAAGGGGTTTTC 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1001 TTTATAATGAGCTGAAAGAAAAGCTGTATGAAGGTGAAAAAGGGGTTTTC 1050
BSNT_04317___ 1051 ATCGGGAATGGCCAGTCTGTTTTTGGGAAGGCGGGGTACGGCTCGCTGAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1051 ATCGGGAATGGCCAGTCTGTTTTTGGGAAGGCGGGGTACGGCTCGCTGAT 1100
BSNT_04317___ 1101 GGCTGCTCCGATGATTCAAAACGACCGGCTTTTAGGCTTTGCGGTTTTAT 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1101 GGCTGCTCCGATGATTCAAAACGACCGGCTTTTAGGCTTTGCGGTTTTAT 1150
BSNT_04317___ 1151 TGAAACAGGAGCTGTACGCTTTTACATTTGAAATGTACAAGCTGTTTCAG 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1151 TGAAACAGGAGCTGTACGCTTTTACATTTGAAATGTACAAGCTGTTTCAG 1200
BSNT_04317___ 1201 GCGCTGATTCATCACGCGACACTGGCTGTAACCAATTCAATGCTTCGCGA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1201 GCGCTGATTCATCACGCGACACTGGCTGTAACCAATTCAATGCTTCGCGA 1250
BSNT_04317___ 1251 CCGCCTTGAGCATCTCGTGAAAACAGATCAGCTGACTGAACTGTTTTCAC 1300
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU29650___yt 1251 CCGCCTTGAGCATCTCGTGAAAACAGATCAGCTGACTGAACTGTATTCAC 1300
BSNT_04317___ 1301 GAGCGTATTTAGATGAAAAAATCCAATACAGCATGAAAATCCACCAAAAG 1350
||||||||||||||||||||||.||||||||||||||||||||.||||||
BSU29650___yt 1301 GAGCGTATTTAGATGAAAAAATTCAATACAGCATGAAAATCCATCAAAAG 1350
BSNT_04317___ 1351 GGTGTTTTTATTCTTGTTGATATTGATAATTTTAAAAATGTAAATGATAC 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1351 GGTGTTTTTATTCTTGTTGATATTGATAATTTTAAAAATGTAAATGATAC 1400
BSNT_04317___ 1401 GTACGGCCATCAGACTGGGGACGAGATTTTAATTCAAGTCGCTTCAGTGA 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1401 GTACGGCCATCAGACTGGGGACGAGATTTTAATTCAAGTCGCTTCAGTGA 1450
BSNT_04317___ 1451 TTAAAAGCAACATCCGAAAGCATGATGTCGGTGCCCGCTGGGGAGGCGAG 1500
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU29650___yt 1451 TTAAAAGCAACATCCGAAAGCATGATGTCGGTGCCCGCTGGGGAGGAGAG 1500
BSNT_04317___ 1501 GAACTGGCGATTTATTTGCCAAATGTGCCGGTTGCAGTGGGGAAACGGAT 1550
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1501 GAGCTGGCGATTTATTTGCCAAATGTGCCGGTTGCAGTGGGGAAACGGAT 1550
BSNT_04317___ 1551 TACCGAGCGACTGGTTTACGCAGTCAGAAAAAATACGAAACCCGAGGTAA 1600
|||||||||||||||||||||.||||||||||||||||||||||||||||
BSU29650___yt 1551 TACCGAGCGACTGGTTTACGCGGTCAGAAAAAATACGAAACCCGAGGTAA 1600
BSNT_04317___ 1601 CCATTTCCTGCGGTATCTCCTGCTGGACGACAGAAACAAAAAAGTCGCTG 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1601 CCATTTCCTGCGGTATCTCCTGCTGGACGACAGAAACAAAAAAGTCGCTG 1650
BSNT_04317___ 1651 AAAGAGCTTGTGCATGAGGCAGATGAAGCGCTCTACAGCGCGAAACGGAG 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1651 AAAGAGCTTGTGCATGAGGCAGATGAAGCGCTCTACAGCGCGAAACGGAG 1700
BSNT_04317___ 1701 CGGGAAAAACCGCTTGATGATTCATGACTCAATAAAATAA 1740
||||||||||||||||||||||||||||||||||||||||
BSU29650___yt 1701 CGGGAAAAACCGCTTGATGATTCATGACTCAATAAAATAA 1740
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