Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04313 and BSU29620

See Amino acid alignment / Visit BSNT_04313 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:54
# Commandline: needle
#    -asequence dna-align/BSNT_04313___hisJ.1.22522.seq
#    -bsequence dna-align/BSU29620___hisJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04313___hisJ-BSU29620___hisJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04313___hisJ-BSU29620___hisJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04313___hisJ
# 2: BSU29620___hisJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 807
# Identity:     803/807 (99.5%)
# Similarity:   803/807 (99.5%)
# Gaps:           0/807 ( 0.0%)
# Score: 3999.0
# 
#
#=======================================

BSNT_04313___      1 ATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi      1 ATGCAAAAGCGAGACGGACATATTCACACACCATTTTGCCCTCACGGCTC     50

BSNT_04313___     51 CAATGACACACTCAGACAATATGCAGAAGAAGCCTTAAAAAAAGGGTTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi     51 CAATGACACACTCAGACAATATGCAGAAGAAGCCTTAAAAAAAGGGTTCG    100

BSNT_04313___    101 AATCGATTACTTTTACCGAACACGCCCCATTGCCGCCCTCTTTTACCGAT    150
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU29620___hi    101 AATCGATTACTTTTACCGAACACGCCCCATTGCCGCCATCTTTTACCGAT    150

BSNT_04313___    151 CCCACGCCGCTGAAAGACAGCGCGATGGCGCAAGCTTCTTTGGAACGCTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    151 CCCACGCCGCTGAAAGACAGCGCGATGGCGCAAGCTTCTTTGGAACGCTA    200

BSNT_04313___    201 TATTCATGAAATTTCCGGATTAAAAAAAGAATATCGCGGACAGCTTAGCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    201 TATTCATGAAATTTCCGGATTAAAAAAAGAATATCGCGGACAGCTTAGCA    250

BSNT_04313___    251 TACGGACAGGGCTTGAAGTCGATTATATCGCTGAATTTGAAGACGAAATT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    251 TACGGACAGGGCTTGAAGTCGATTATATCGCTGAATTTGAAGACGAAATT    300

BSNT_04313___    301 ACATTATTCCTAGACACATACGGGCCATATTTAGATGACAGCATCTTATC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    301 ACATTATTCCTAGACACATACGGGCCATATTTAGATGACAGCATCTTATC    350

BSNT_04313___    351 CGTTCATTTTTTGCGCACAGACTCTTCCTATCTATGCCTTGATTATGACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    351 CGTTCATTTTTTGCGCACAGACTCTTCCTATCTATGCCTTGATTATGACG    400

BSNT_04313___    401 AGCATACCTTCAAAGAGCTGATTTCAGCCTGCGGAAGCATTGAAGCGGTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    401 AGCATACCTTCAAAGAGCTGATTTCAGCCTGCGGAAGCATTGAAGCGGTA    450

BSNT_04313___    451 TATGAACAATATTACCGGAGTATCTATTCTTCCATTGTAGCATCTCTCGG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    451 TATGAACAATATTACCGGAGTATCTATTCTTCCATTGTAGCATCTCTCGG    500

BSNT_04313___    501 CGTTTATAAGCCAAAAAGAGTCGGTCACATCACACTCGTCCAAAAATTCA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    501 CGTTTATAAGCCAAAAAGAGTCGGTCACATCACACTCGTCCAAAAATTCA    550

BSNT_04313___    551 TCAAGCTGTTTCCATACAGCATGTCAGAACATATTCGCGGCCTCGTTTCC    600
                     ||||||||||||||||||||||||||||.||||||||||||||||||||.
BSU29620___hi    551 TCAAGCTGTTTCCATACAGCATGTCAGAGCATATTCGCGGCCTCGTTTCT    600

BSNT_04313___    601 CTGTGCCTGAATGCCATTGAAGAAAACGGAATGGAGCTCGACTTCAATAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    601 CTGTGCCTGAATGCCATTGAAGAAAACGGAATGGAGCTCGACTTCAATAC    650

BSNT_04313___    651 TTCCGGCTTAAGAAAAACTTACGCTGGCGGTATTTATATCGAGGATTGGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    651 TTCCGGCTTAAGAAAAACTTACGCTGGCGGTATTTATATCGAGGATTGGA    700

BSNT_04313___    701 TGCTGAATGAAGCGAAGCAAAAGAAGATCCCGCTTGTGTTTGGGTCAGAT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU29620___hi    701 TGCTGAATGAAGCGAAGCAAAAGAAGATCCCGCTTGTGTTTGGGTCTGAT    750

BSNT_04313___    751 GCCCATCAAGCGGGAGATGTCGGATATGCGTATGAGGCGTTTTTGGAACG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29620___hi    751 GCCCATCAAGCGGGAGATGTCGGATATGCGTATGAGGCGTTTTTGGAACG    800

BSNT_04313___    801 GTGCTAG    807
                     |||||||
BSU29620___hi    801 GTGCTAG    807


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.