Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04302 and BSU29540

See Amino acid alignment / Visit BSNT_04302 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence dna-align/BSNT_04302___ppnK.1.22522.seq
#    -bsequence dna-align/BSU29540___ytdI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04302___ppnK-BSU29540___ytdI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04302___ppnK-BSU29540___ytdI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04302___ppnK
# 2: BSU29540___ytdI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 804
# Identity:     784/804 (97.5%)
# Similarity:   784/804 (97.5%)
# Gaps:           0/804 ( 0.0%)
# Score: 3840.0
# 
#
#=======================================

BSNT_04302___      1 ATGACCGATCAACGCCGTAATGTTTATTTTTTTCACAAACAGGATCAGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt      1 ATGACCGATCAACGCCGTAATGTTTATTTTTTTCACAAACAGGATCAGGA     50

BSNT_04302___     51 AACGAACGAACAAGCCCGCTCGTTAACACAATTGGCGGAAGAGCATGGAT    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU29540___yt     51 AACGAACGAACAAGCCCGCTCGTTAACACAATTAGCGGAAGAGCATGGAT    100

BSNT_04302___    101 TTACCGTTGTGAACCAGCACTCAGACGCTAATATTATCGCTAGCATTGGC    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU29540___yt    101 TTACCGTTGTGAACCAGCACTCAGACGCCAATATTATCGCTAGCATTGGC    150

BSNT_04302___    151 GGGGACGGCACATTTTTGCAGGCAGTCAGAAAGACGAATTTTCGTGACGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    151 GGGGACGGCACATTTTTGCAGGCAGTCAGAAAGACGAATTTTCGTGACGA    200

BSNT_04302___    201 CTGCTTGTACGTCGGCATTACCAAAAAGGGGAAAGCTCATTTATATTGCG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    201 CTGCTTGTACGTCGGCATTACCAAAAAGGGGAAAGCTCATTTATATTGCG    250

BSNT_04302___    251 ACTTTCATAGTGATGAGCGAGAAAAAATGGTCGATGCAATGACGTTTGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    251 ACTTTCATAGTGATGAGCGAGAAAAAATGGTCGATGCAATGACGTTTGAA    300

BSNT_04302___    301 CAAATTGAAGTGAGAAAATATCCGCTGATTGAAGTGACAGTGGATAACGC    350
                     ||||||||||||||||||||.||||||||||||||||||||||||.|.||
BSU29540___yt    301 CAAATTGAAGTGAGAAAATACCCGCTGATTGAAGTGACAGTGGATCAAGC    350

BSNT_04302___    351 CAGTCCTTTTCATTGCCTAAACGAGGTTTCCATCCGTTCAAGCATCATTA    400
                     ||||||||||||.|||.||||||||||.||||||||.|||||||||||.|
BSU29540___yt    351 CAGTCCTTTTCACTGCTTAAACGAGGTATCCATCCGCTCAAGCATCATCA    400

BSNT_04302___    401 AAACCTTTGTGATGGACGTGCTGATTGACGATCTGCACTTTGAAACGTTT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    401 AAACCTTTGTGATGGACGTGCTGATTGACGATCTGCACTTTGAAACGTTT    450

BSNT_04302___    451 AGAGGTGACGGAATGATCATCTCAACGCCTACAGGCAGCACCGCCTATAA    500
                     |||||||||||||||||.|||||||||||||||||.||||||||||||||
BSU29540___yt    451 AGAGGTGACGGAATGATTATCTCAACGCCTACAGGGAGCACCGCCTATAA    500

BSNT_04302___    501 CAAGTCTGTTGCAGGAGCGGTTGTTGATCCGCTGCTCCCATGCATGCAGG    550
                     ||||||||||||||||||.|||||||||||..||||.|||||||||||||
BSU29540___yt    501 CAAGTCTGTTGCAGGAGCTGTTGTTGATCCATTGCTTCCATGCATGCAGG    550

BSNT_04302___    551 TATCTGAGCTTGCTTCTCTTAACAATAACACCTACCGGACACTCGGCTCG    600
                     ||||.||||||||.||.|||||||||||.|||||||||||||||||||||
BSU29540___yt    551 TATCAGAGCTTGCATCCCTTAACAATAATACCTACCGGACACTCGGCTCG    600

BSNT_04302___    601 CCATTTGTCCTCAGCTCTGACCGAAAGCTGACCCTTCGTGTGGTGCAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    601 CCATTTGTCCTCAGCTCTGACCGAAAGCTGACCCTTCGTGTGGTGCAGGA    650

BSNT_04302___    651 CGGCAACGAACACCCAATCATCGGCTTGGACAATGAAGCACTCAGCACGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    651 CGGCAACGAACACCCAATCATCGGCTTGGACAATGAAGCACTCAGCACGA    700

BSNT_04302___    701 GAAATGTGAAAACGATCGAAATCAAACTGTCTAATAAGAAAATCAAAACA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    701 GAAATGTGAAAACGATCGAAATCAAACTGTCTAATAAGAAAATCAAAACA    750

BSNT_04302___    751 GTCAAACTAAAGGACAATTCATTTTGGGAAAAAGTGAAGCGTACTTTTTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29540___yt    751 GTCAAACTAAAGGACAATTCATTTTGGGAAAAAGTGAAGCGTACTTTTTT    800

BSNT_04302___    801 ATAG    804
                     ||||
BSU29540___yt    801 ATAG    804


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