Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04299 and BSU29530

See Amino acid alignment / Visit BSNT_04299 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:52
# Commandline: needle
#    -asequence dna-align/BSNT_04299___sppA.1.22522.seq
#    -bsequence dna-align/BSU29530___sppA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04299___sppA-BSU29530___sppA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04299___sppA-BSU29530___sppA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04299___sppA
# 2: BSU29530___sppA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1008
# Identity:    1001/1008 (99.3%)
# Similarity:  1001/1008 (99.3%)
# Gaps:           0/1008 ( 0.0%)
# Score: 4977.0
# 
#
#=======================================

BSNT_04299___      1 ATGAATGCAAAAAGATGGATTGCATTAGTGATTGCTCTGGGGATTTTCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp      1 ATGAATGCAAAAAGATGGATTGCATTAGTGATTGCTCTGGGGATTTTCGG     50

BSNT_04299___     51 CGTGTCTATTATCGTCAGCATCTCTATGAGTTTCTTTGAAAGCGTCAAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp     51 CGTGTCTATTATCGTCAGCATCTCTATGAGTTTCTTTGAAAGCGTCAAAG    100

BSNT_04299___    101 GCGCTCAAACGGATCTCACATCACTGACGGATGAATCGCAGGAAAAGACG    150
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU29530___sp    101 GCGCTCAAACGGATCTCACATCACTGACGGATGAATCGCAGGAGAAGACG    150

BSNT_04299___    151 CTGGAAAACGGCAGTCTCTCAAGTAAAATTGCCGTATTAGAGGTCAGCGG    200
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU29530___sp    151 CTGGAAAACGGCAGTCCCTCAAGTAAAATTGCCGTATTAGAGGTCAGCGG    200

BSNT_04299___    201 CACCATTCAGGATAATGGGGACTCAAGCAGTCTGCTTGGTGCAGACGGAT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    201 CACCATTCAGGATAATGGGGACTCAAGCAGTCTGCTTGGTGCAGACGGAT    250

BSNT_04299___    251 ATAACCACAGAACGTTCTTAAAAAACCTTGAGCGCGCAAAAGATGACAAG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    251 ATAACCACAGAACGTTCTTAAAAAACCTTGAGCGCGCAAAAGATGACAAG    300

BSNT_04299___    301 ACGGTCAAAGGTATCGTTCTGAAGGTGAATTCTCCGGGTGGCGGAGTGTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    301 ACGGTCAAAGGTATCGTTCTGAAGGTGAATTCTCCGGGTGGCGGAGTGTA    350

BSNT_04299___    351 TGAAAGTGCTGAAATACATAAGAAACTGGAAGAAATCAAGAAAGAAACGA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    351 TGAAAGTGCTGAAATACATAAGAAACTGGAAGAAATCAAGAAAGAAACGA    400

BSNT_04299___    401 AAAAACCGATTTACGTGTCAATGGGTTCGATGGCAGCATCAGGAGGCTAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    401 AAAAACCGATTTACGTGTCAATGGGTTCGATGGCAGCATCAGGAGGCTAT    450

BSNT_04299___    451 TACATCTCAGCAGCGGCTGATAAGATTTTTGCGACACCGGAAACCCTGAC    500
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    451 TACATCTCAACAGCGGCTGATAAGATTTTTGCGACACCGGAAACCCTGAC    500

BSNT_04299___    501 CGGGTCACTCGGCGTCATTATGGAAAGCGTCAATTATTCAAAACTTGCCG    550
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU29530___sp    501 CGGGTCACTCGGCGTCATTATGGAAAGCGTCAATTATTCAAAGCTTGCCG    550

BSNT_04299___    551 ATAAGCTTGGCATTTCTTTTGAAACGATTAAGAGCGGGGCCCATAAGGAC    600
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    551 ACAAGCTTGGCATTTCTTTTGAAACGATTAAGAGCGGGGCCCATAAGGAC    600

BSNT_04299___    601 ATTATGTCTCCTTCCCGTGAGATGACGAAAGAAGAAAAAAACATCATGCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    601 ATTATGTCTCCTTCCCGTGAGATGACGAAAGAAGAAAAAAACATCATGCA    650

BSNT_04299___    651 ATCGATGGTTGATAATTCGTATGAAGGCTTTGTTGATGTCATTTCAAAAG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    651 ATCGATGGTTGATAATTCGTATGAAGGCTTTGTTGATGTCATTTCAAAAG    700

BSNT_04299___    701 GGCGCAGCATGTCGAAAGCAGAGGTAAAGAAAATTGCGGACGGCCGCGTG    750
                     |||||.|||||.||||||||||||||||||||||||||||||||||||||
BSU29530___sp    701 GGCGCGGCATGCCGAAAGCAGAGGTAAAGAAAATTGCGGACGGCCGCGTG    750

BSNT_04299___    751 TATGACGGACGGCAGGCGAAAAAACTGAACCTCGTTGATGAGCTTGGTTT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    751 TATGACGGACGGCAGGCGAAAAAACTGAACCTCGTTGATGAGCTTGGTTT    800

BSNT_04299___    801 TTATGACGATACCATTACGGCCATGAAAAAGGATCACAAGGATTTGAAAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    801 TTATGACGATACCATTACGGCCATGAAAAAGGATCACAAGGATTTGAAAA    850

BSNT_04299___    851 ACGCCTCTGTCATTTCTTATGAGGAAAGCTTCGGATTAGGCTCACTGTTT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    851 ACGCCTCTGTCATTTCTTATGAGGAAAGCTTCGGATTAGGCTCACTGTTT    900

BSNT_04299___    901 TCCATGGGCGCGAACAAAATGTTTAAAAGTGAAATTGATTTTTTGAATAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    901 TCCATGGGCGCGAACAAAATGTTTAAAAGTGAAATTGATTTTTTGAATAT    950

BSNT_04299___    951 GAGAGAAATTCTATCGCAATCCGGTTCGCCGAGAATGATGTATCTCTATG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29530___sp    951 GAGAGAAATTCTATCGCAATCCGGTTCGCCGAGAATGATGTATCTCTATG   1000

BSNT_04299___   1001 CGAAGTAG   1008
                     ||||||||
BSU29530___sp   1001 CGAAGTAG   1008


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04299 and BSU29530

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
