Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04276 and BSU29270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_04276___ytoI.1.22522.seq
# -bsequence dna-align/BSU29270___ytoI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04276___ytoI-BSU29270___ytoI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04276___ytoI-BSU29270___ytoI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04276___ytoI
# 2: BSU29270___ytoI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1329
# Identity: 1316/1329 (99.0%)
# Similarity: 1316/1329 (99.0%)
# Gaps: 9/1329 ( 0.7%)
# Score: 6564.0
#
#
#=======================================
BSNT_04276___ 1 GTGAAAGGCTTGGCAACGAAGCATGAACAAATTTTAACGTATATCGATTC 50
|||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 1 ---------TTGGCAACGAAGCATGAACAAATTTTAACGTATATCGATTC 41
BSNT_04276___ 51 ACTGCCTGTCGGTGAAAAAATTTCTGTCCGAAGAATTGCAAAGGAAATGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 42 ACTGCCTGTCGGTGAAAAAATTTCTGTCCGAAGAATTGCAAAGGAAATGA 91
BSNT_04276___ 101 AAGTAAGCGAAGGAACCGCGTACAGAGCGATCAAGGAAGCAGAGAATAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 92 AAGTAAGCGAAGGAACCGCGTACAGAGCGATCAAGGAAGCAGAGAATAAA 141
BSNT_04276___ 151 GGGTTTGTCAGCACGATTGAACGTGTGGGCACAATCAGAATTGAACAAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 142 GGGTTTGTCAGCACGATTGAACGTGTGGGCACAATCAGAATTGAACAAAA 191
BSNT_04276___ 201 GAAAAAAGAGAACATTGAAAAGCTTACCTATGCAGAGGTTGTAAATGTTA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 192 GAAAAAAGAGAACATTGAAAAGCTTACCTATGCAGAGGTTGTAAATGTTA 241
BSNT_04276___ 251 TAGACGGACAAGTGCTCGGAGGCAGGGCAGGGCTCCATAAGACATTGAAT 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 242 TAGACGGACAAGTGCTCGGAGGCAGGGCAGGGCTCCATAAGACATTGAAT 291
BSNT_04276___ 301 AAATTCGTCATCGGCGCGATGGAGCTTGACGCGATGATGCGTTACACCGC 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 292 AAATTCGTCATCGGCGCGATGGAGCTTGACGCGATGATGCGTTACACCGC 341
BSNT_04276___ 351 AGCGGGGAATCTTTTGATTGTCGGAAACAGAATCAATGCACACAGGCAGG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 342 AGCGGGGAATCTTTTGATTGTCGGAAACAGAATCAATGCACACAGGCAGG 391
BSNT_04276___ 401 CGCTTGAAGCGGGCGCGGCCGTATTGGTGACCGGGGGCTTTAACACGGAT 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 392 CGCTTGAAGCGGGCGCGGCCGTATTGGTGACCGGGGGCTTTAACACGGAT 441
BSNT_04276___ 451 GACAGCATTGTGCAGCTGGCAGATGAGCTTGAACTGCCGATTTTATCCAC 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 442 GACAGCATTGTGCAGCTGGCAGATGAGCTTGAACTGCCGATTTTATCCAC 491
BSNT_04276___ 501 GAGCTATGACACCTTTACAGTTGCCGCTATGATTAACCGGGCAATTTATG 550
|||||||||||||||||||||||||||.|||||||||||||||||.||||
BSU29270___yt 492 GAGCTATGACACCTTTACAGTTGCCGCGATGATTAACCGGGCAATATATG 541
BSNT_04276___ 551 ACCAGCTGATCAAAAAAGAAATTGTTTTGGTGGAGGACATCCTAACACCT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 542 ACCAGCTGATCAAAAAAGAAATTGTTTTGGTGGAGGACATCCTAACACCT 591
BSNT_04276___ 601 GCTGACCGCACGGTATATCTTTCGCCTAAGGATAAACTTGAAAAATGGTA 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 592 GCTGACCGCACGGTATATCTTTCGCCTAAGGATAAACTTGAAAAATGGTA 641
BSNT_04276___ 651 TGAGAAAAATTTTGAAACGGGGCACGGACGCTTCCCGGTTGTCGACGATC 700
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU29270___yt 642 TGAGAAAAATTTTGAAACGGGGCACGGCCGCTTCCCGGTTGTCGACGATC 691
BSNT_04276___ 701 AAATGAAAATCCATGGCATTCTGACATCAAAAGATATTGCTGGCCATGAC 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 692 AAATGAAAATCCATGGCATTCTGACATCAAAAGATATTGCTGGCCATGAC 741
BSNT_04276___ 751 CGAAATGCATCTATAGAAAAAGTCATGACCAAAAATCCCGTCACGGTTAT 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 742 CGAAATGCATCTATAGAAAAAGTCATGACCAAAAATCCCGTCACGGTTAT 791
BSNT_04276___ 801 TGGGAAAACATCTGTCGCTTCAGCTGCGCAAATGATGGTATGGGAAGGGA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 792 TGGGAAAACATCTGTCGCTTCAGCTGCGCAAATGATGGTATGGGAAGGGA 841
BSNT_04276___ 851 TCGAAGTGCTTCCCGTCACTGACGGCCACCAAAAACTCATCGGCATGATC 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 842 TCGAAGTGCTTCCCGTCACTGACGGCCACCAAAAACTCATCGGCATGATC 891
BSNT_04276___ 901 AGCCGCCAAGACGTATTGAAAGCTCTTCAAATGATTCAAAAGCAGCCGCA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 892 AGCCGCCAAGACGTATTGAAAGCTCTTCAAATGATTCAAAAGCAGCCGCA 941
BSNT_04276___ 951 GGTCGGGGAGAAGCTTGATGATATCGTTTCAAGGGGGTTTAAAGATGAGG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 942 GGTCGGGGAGAAGCTTGATGATATCGTTTCAAGGGGGTTTAAAGATGAGG 991
BSNT_04276___ 1001 GTGATGATAAAGAAGATCAAACGGTTTACGAGTATGAAGTCACGCCGCAA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 992 GTGATGATAAAGAAGATCAAACGGTTTACGAGTATGAAGTCACGCCGCAA 1041
BSNT_04276___ 1051 ATGACAAATCAGCTTGGAACCATTTCTTATGGCGTATTTACGACCATTTT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 1042 ATGACAAATCAGCTTGGAACCATTTCTTATGGCGTATTTACGACCATTTT 1091
BSNT_04276___ 1101 GACGCAAGCGGCAAACCGATTTTTGCGCTCGAAAAAACGCGGCGAACTCG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 1092 GACGCAAGCGGCAAACCGATTTTTGCGCTCGAAAAAACGCGGCGAACTCG 1141
BSNT_04276___ 1151 TCATAGAGAGCATCACCATCTTCTTTTTGAAGCCTGTGCAGATGGAATCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 1142 TCATAGAGAGCATCACCATCTTCTTTTTGAAGCCTGTGCAGATGGAATCA 1191
BSNT_04276___ 1201 GTCATCGAAGTCAAACCTCGCATCTTGGAGGCTGGCAGAAAGTTTGGGAA 1250
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU29270___yt 1192 GTCATCGAAGTCAAACCTCGCATCTTGGAGGCCGGCAGAAAGTTTGGGAA 1241
BSNT_04276___ 1251 AATGGAAGTGGAAGTGCACAGCCAAGGTCATATCGTGTCTAAAGCGATGC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt 1242 AATGGAAGTGGAAGTGCACAGCCAAGGTCATATCGTGTCTAAAGCGATGC 1291
BSNT_04276___ 1301 TGATGGTTCAGCTGATGGAAAGAAGCTAA 1329
|||||||||||||||||||||||||||||
BSU29270___yt 1292 TGATGGTTCAGCTGATGGAAAGAAGCTAA 1320
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