Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04276 and BSU29270

See Amino acid alignment / Visit BSNT_04276 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:50
# Commandline: needle
#    -asequence dna-align/BSNT_04276___ytoI.1.22522.seq
#    -bsequence dna-align/BSU29270___ytoI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04276___ytoI-BSU29270___ytoI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04276___ytoI-BSU29270___ytoI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04276___ytoI
# 2: BSU29270___ytoI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1329
# Identity:    1316/1329 (99.0%)
# Similarity:  1316/1329 (99.0%)
# Gaps:           9/1329 ( 0.7%)
# Score: 6564.0
# 
#
#=======================================

BSNT_04276___      1 GTGAAAGGCTTGGCAACGAAGCATGAACAAATTTTAACGTATATCGATTC     50
                              |||||||||||||||||||||||||||||||||||||||||
BSU29270___yt      1 ---------TTGGCAACGAAGCATGAACAAATTTTAACGTATATCGATTC     41

BSNT_04276___     51 ACTGCCTGTCGGTGAAAAAATTTCTGTCCGAAGAATTGCAAAGGAAATGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt     42 ACTGCCTGTCGGTGAAAAAATTTCTGTCCGAAGAATTGCAAAGGAAATGA     91

BSNT_04276___    101 AAGTAAGCGAAGGAACCGCGTACAGAGCGATCAAGGAAGCAGAGAATAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt     92 AAGTAAGCGAAGGAACCGCGTACAGAGCGATCAAGGAAGCAGAGAATAAA    141

BSNT_04276___    151 GGGTTTGTCAGCACGATTGAACGTGTGGGCACAATCAGAATTGAACAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    142 GGGTTTGTCAGCACGATTGAACGTGTGGGCACAATCAGAATTGAACAAAA    191

BSNT_04276___    201 GAAAAAAGAGAACATTGAAAAGCTTACCTATGCAGAGGTTGTAAATGTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    192 GAAAAAAGAGAACATTGAAAAGCTTACCTATGCAGAGGTTGTAAATGTTA    241

BSNT_04276___    251 TAGACGGACAAGTGCTCGGAGGCAGGGCAGGGCTCCATAAGACATTGAAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    242 TAGACGGACAAGTGCTCGGAGGCAGGGCAGGGCTCCATAAGACATTGAAT    291

BSNT_04276___    301 AAATTCGTCATCGGCGCGATGGAGCTTGACGCGATGATGCGTTACACCGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    292 AAATTCGTCATCGGCGCGATGGAGCTTGACGCGATGATGCGTTACACCGC    341

BSNT_04276___    351 AGCGGGGAATCTTTTGATTGTCGGAAACAGAATCAATGCACACAGGCAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    342 AGCGGGGAATCTTTTGATTGTCGGAAACAGAATCAATGCACACAGGCAGG    391

BSNT_04276___    401 CGCTTGAAGCGGGCGCGGCCGTATTGGTGACCGGGGGCTTTAACACGGAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    392 CGCTTGAAGCGGGCGCGGCCGTATTGGTGACCGGGGGCTTTAACACGGAT    441

BSNT_04276___    451 GACAGCATTGTGCAGCTGGCAGATGAGCTTGAACTGCCGATTTTATCCAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    442 GACAGCATTGTGCAGCTGGCAGATGAGCTTGAACTGCCGATTTTATCCAC    491

BSNT_04276___    501 GAGCTATGACACCTTTACAGTTGCCGCTATGATTAACCGGGCAATTTATG    550
                     |||||||||||||||||||||||||||.|||||||||||||||||.||||
BSU29270___yt    492 GAGCTATGACACCTTTACAGTTGCCGCGATGATTAACCGGGCAATATATG    541

BSNT_04276___    551 ACCAGCTGATCAAAAAAGAAATTGTTTTGGTGGAGGACATCCTAACACCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    542 ACCAGCTGATCAAAAAAGAAATTGTTTTGGTGGAGGACATCCTAACACCT    591

BSNT_04276___    601 GCTGACCGCACGGTATATCTTTCGCCTAAGGATAAACTTGAAAAATGGTA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    592 GCTGACCGCACGGTATATCTTTCGCCTAAGGATAAACTTGAAAAATGGTA    641

BSNT_04276___    651 TGAGAAAAATTTTGAAACGGGGCACGGACGCTTCCCGGTTGTCGACGATC    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU29270___yt    642 TGAGAAAAATTTTGAAACGGGGCACGGCCGCTTCCCGGTTGTCGACGATC    691

BSNT_04276___    701 AAATGAAAATCCATGGCATTCTGACATCAAAAGATATTGCTGGCCATGAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    692 AAATGAAAATCCATGGCATTCTGACATCAAAAGATATTGCTGGCCATGAC    741

BSNT_04276___    751 CGAAATGCATCTATAGAAAAAGTCATGACCAAAAATCCCGTCACGGTTAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    742 CGAAATGCATCTATAGAAAAAGTCATGACCAAAAATCCCGTCACGGTTAT    791

BSNT_04276___    801 TGGGAAAACATCTGTCGCTTCAGCTGCGCAAATGATGGTATGGGAAGGGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    792 TGGGAAAACATCTGTCGCTTCAGCTGCGCAAATGATGGTATGGGAAGGGA    841

BSNT_04276___    851 TCGAAGTGCTTCCCGTCACTGACGGCCACCAAAAACTCATCGGCATGATC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    842 TCGAAGTGCTTCCCGTCACTGACGGCCACCAAAAACTCATCGGCATGATC    891

BSNT_04276___    901 AGCCGCCAAGACGTATTGAAAGCTCTTCAAATGATTCAAAAGCAGCCGCA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    892 AGCCGCCAAGACGTATTGAAAGCTCTTCAAATGATTCAAAAGCAGCCGCA    941

BSNT_04276___    951 GGTCGGGGAGAAGCTTGATGATATCGTTTCAAGGGGGTTTAAAGATGAGG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    942 GGTCGGGGAGAAGCTTGATGATATCGTTTCAAGGGGGTTTAAAGATGAGG    991

BSNT_04276___   1001 GTGATGATAAAGAAGATCAAACGGTTTACGAGTATGAAGTCACGCCGCAA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt    992 GTGATGATAAAGAAGATCAAACGGTTTACGAGTATGAAGTCACGCCGCAA   1041

BSNT_04276___   1051 ATGACAAATCAGCTTGGAACCATTTCTTATGGCGTATTTACGACCATTTT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt   1042 ATGACAAATCAGCTTGGAACCATTTCTTATGGCGTATTTACGACCATTTT   1091

BSNT_04276___   1101 GACGCAAGCGGCAAACCGATTTTTGCGCTCGAAAAAACGCGGCGAACTCG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt   1092 GACGCAAGCGGCAAACCGATTTTTGCGCTCGAAAAAACGCGGCGAACTCG   1141

BSNT_04276___   1151 TCATAGAGAGCATCACCATCTTCTTTTTGAAGCCTGTGCAGATGGAATCA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt   1142 TCATAGAGAGCATCACCATCTTCTTTTTGAAGCCTGTGCAGATGGAATCA   1191

BSNT_04276___   1201 GTCATCGAAGTCAAACCTCGCATCTTGGAGGCTGGCAGAAAGTTTGGGAA   1250
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU29270___yt   1192 GTCATCGAAGTCAAACCTCGCATCTTGGAGGCCGGCAGAAAGTTTGGGAA   1241

BSNT_04276___   1251 AATGGAAGTGGAAGTGCACAGCCAAGGTCATATCGTGTCTAAAGCGATGC   1300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29270___yt   1242 AATGGAAGTGGAAGTGCACAGCCAAGGTCATATCGTGTCTAAAGCGATGC   1291

BSNT_04276___   1301 TGATGGTTCAGCTGATGGAAAGAAGCTAA   1329
                     |||||||||||||||||||||||||||||
BSU29270___yt   1292 TGATGGTTCAGCTGATGGAAAGAAGCTAA   1320


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