Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04275 and BSU29260

See Amino acid alignment / Visit BSNT_04275 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:49
# Commandline: needle
#    -asequence dna-align/BSNT_04275___ytpI.1.22522.seq
#    -bsequence dna-align/BSU29260___ytpI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04275___ytpI-BSU29260___ytpI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04275___ytpI-BSU29260___ytpI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04275___ytpI
# 2: BSU29260___ytpI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 303
# Identity:     301/303 (99.3%)
# Similarity:   301/303 (99.3%)
# Gaps:           0/303 ( 0.0%)
# Score: 1497.0
# 
#
#=======================================

BSNT_04275___      1 ATGCTGGTTCTTGTTTTTTTGATTGGGCTTTCCGCCTGCTTTTATGTGTA     50
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU29260___yt      1 ATGCTGGTTCTTGTTTTTTTGATTGGGCTTTCAGCCTGCTTTTATGTGTA     50

BSNT_04275___     51 CTATAAAGTAAAAGGCGTACGGGCAAAGCCATCTTTGGCAAAAGAAATAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29260___yt     51 CTATAAAGTAAAAGGCGTACGGGCAAAGCCATCTTTGGCAAAAGAAATAT    100

BSNT_04275___    101 GTTCAGCAAAATCAAGCATGGCCTTAGGGTCACTAGTCCTGTTCTACGGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29260___yt    101 GTTCAGCAAAATCAAGCATGGCCTTAGGGTCACTAGTCCTGTTCTACGGG    150

BSNT_04275___    151 CTCAACCAAATGATATTATTCCATTCAGTATTAACGTTAGTAATCGGCGG    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU29260___yt    151 CTTAACCAAATGATATTATTCCATTCAGTATTAACGTTAGTAATCGGCGG    200

BSNT_04275___    201 TATCTTTATCGTCATAGGAGCAGGAAGCGCTTGGGCAGGTTATAAAGCCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29260___yt    201 TATCTTTATCGTCATAGGAGCAGGAAGCGCTTGGGCAGGTTATAAAGCCT    250

BSNT_04275___    251 TCAGGCATTACAATCCCCTTCACGCCAAAGAAGCTGAAAGAGATCACGCG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29260___yt    251 TCAGGCATTACAATCCCCTTCACGCCAAAGAAGCTGAAAGAGATCACGCG    300

BSNT_04275___    301 TAA    303
                     |||
BSU29260___yt    301 TAA    303


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