Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04266 and BSU29200

See Amino acid alignment / Visit BSNT_04266 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:47
# Commandline: needle
#    -asequence dna-align/BSNT_04266___accA.1.22522.seq
#    -bsequence dna-align/BSU29200___accA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04266___accA-BSU29200___accA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04266___accA-BSU29200___accA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04266___accA
# 2: BSU29200___accA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     971/978 (99.3%)
# Similarity:   971/978 (99.3%)
# Gaps:           0/978 ( 0.0%)
# Score: 4827.0
# 
#
#=======================================

BSNT_04266___      1 GTGGCTCCAAGATTAGAATTTGAAAAACCGGTGATTGAACTGCAAACCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac      1 GTGGCTCCAAGATTAGAATTTGAAAAACCGGTGATTGAACTGCAAACCAA     50

BSNT_04266___     51 AATCGCCGAACTAAAAAAATTCACCCAAGATTCCGATATGGATCTAAGTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac     51 AATCGCCGAACTAAAAAAATTCACCCAAGATTCCGATATGGATCTAAGTG    100

BSNT_04266___    101 CGGAAATCGAACGGCTCGAAGACCGTCTCGCTAAGCTTCAGGATGATATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    101 CGGAAATCGAACGGCTCGAAGACCGTCTCGCTAAGCTTCAGGATGATATT    150

BSNT_04266___    151 TACAAAAATCTGAAGCCATGGGACCGGGTTCAAATCGCGCGTCTGGCGGA    200
                     |||||||||.|||||||.||||||||||||||||||||||||||||||||
BSU29200___ac    151 TACAAAAATTTGAAGCCGTGGGACCGGGTTCAAATCGCGCGTCTGGCGGA    200

BSNT_04266___    201 CCGTCCGACAACTCTTGATTATATCGAACACCTGTTTACCGACTTTTTTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    201 CCGTCCGACAACTCTTGATTATATCGAACACCTGTTTACCGACTTTTTTG    250

BSNT_04266___    251 AATGTCACGGAGACAGAGCGTACGGGGACGATGAAGCCATTGTCGGCGGG    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    251 AATGTCACGGAGACAGAGCGTACGGGGACGATGAAGCCATTGTCGGCGGG    300

BSNT_04266___    301 ATTGCGAAGTTCCACGGCCTCCCTGTAACGGTAATCGGGCATCAGCGCGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    301 ATTGCGAAGTTCCACGGCCTCCCTGTAACGGTAATCGGGCATCAGCGCGG    350

BSNT_04266___    351 CAAAGACACGAAGGAAAACCTAGTCCGCAATTTTGGGATGCCGCATCCAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    351 CAAAGACACGAAGGAAAACCTAGTCCGCAATTTTGGGATGCCGCATCCAG    400

BSNT_04266___    401 AAGGCTACAGAAAAGCGCTTCGTCTGATGAAACAGGCTGACAAATTTAAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    401 AAGGCTACAGAAAAGCGCTTCGTCTGATGAAACAGGCTGACAAATTTAAC    450

BSNT_04266___    451 AGACCAATTATCTGTTTTATTGATACGAAGGGGGCATACCCCGGACGAGC    500
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU29200___ac    451 AGACCAATTATCTGTTTTATTGATACGAAGGGGGCATACCCTGGACGAGC    500

BSNT_04266___    501 AGCTGAAGAAAGAGGACAAAGTGAAGCTATTGCCAAAAACCTGTTTGAGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    501 AGCTGAAGAAAGAGGACAAAGTGAAGCTATTGCCAAAAACCTGTTTGAGA    550

BSNT_04266___    551 TGGCCGGCCTTCGAGTGCCTGTTATCTGCATCGTCATCGGTGAAGGCGGA    600
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU29200___ac    551 TGGCCGGCCTTCGAGTGCCTGTTATCTGCATCGTCATTGGTGAAGGCGGA    600

BSNT_04266___    601 AGCGGCGGAGCCCTTGGTCTGGGTGTAGGTAATCACTTGCATATGCTGGA    650
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU29200___ac    601 AGCGGCGGAGCCCTTGGTCTGGGTGTAGGCAATCACTTGCATATGCTGGA    650

BSNT_04266___    651 AAACTCTACTTATTCTGTTATTTCTCCGGAAGGTGCCGCGGCACTTTTAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    651 AAACTCTACTTATTCTGTTATTTCTCCGGAAGGTGCCGCGGCACTTTTAT    700

BSNT_04266___    701 GGAAGGACTCCAGTCTTGCTAAAAAAGCAGCAGAAACAATGAAAATCACT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    701 GGAAGGACTCCAGTCTTGCTAAAAAAGCAGCAGAAACAATGAAAATCACT    750

BSNT_04266___    751 GCGCCGGATTTAAAAGAATTAGGTATTATAGATCATATGATTAAAGAAGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    751 GCGCCGGATTTAAAAGAATTAGGTATTATAGATCATATGATTAAAGAAGT    800

BSNT_04266___    801 AAAAGGCGGAGCGCACCATGATGTGAAGCTGCAGGCAAGCTATATGGACG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29200___ac    801 AAAAGGCGGAGCGCACCATGATGTGAAGCTGCAGGCAAGCTATATGGACG    850

BSNT_04266___    851 AAACCCTTAAACAATCGTTAAAAACTTTGCTGAAGCTGAGCGAAGAAGAA    900
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU29200___ac    851 AAACCCTTAAACAATCGTTAAAAACTTTACTGAAGCTGAGCGAAGAAGAA    900

BSNT_04266___    901 TTAGTTCAGCAGCGCTATGAAAAATATAAAGCAATTGGCAAAGTCTCGGT    950
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU29200___ac    901 TTAGTTCAGCAGCGTTATGAAAAATATAAAGCAATTGGCAAAGTCTCGGT    950

BSNT_04266___    951 TGAAGATCAATATATCGGGGTAAACTAA    978
                     ||||||||||||||||||||||||||||
BSU29200___ac    951 TGAAGATCAATATATCGGGGTAAACTAA    978


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04266 and BSU29200

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
