Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04247 and BSU29090
See
Amino acid alignment /
Visit
BSNT_04247 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:45
# Commandline: needle
# -asequence dna-align/BSNT_04247___polA.1.22522.seq
# -bsequence dna-align/BSU29090___polA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04247___polA-BSU29090___polA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04247___polA-BSU29090___polA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04247___polA
# 2: BSU29090___polA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2643
# Identity: 2632/2643 (99.6%)
# Similarity: 2632/2643 (99.6%)
# Gaps: 0/2643 ( 0.0%)
# Score: 13116.0
#
#
#=======================================
BSNT_04247___ 1 ATGACGGAACGAAAAAAATTAGTGCTTGTAGACGGAAACAGTCTGGCTTA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1 ATGACGGAACGAAAAAAATTAGTGCTTGTAGACGGAAACAGTCTGGCTTA 50
BSNT_04247___ 51 CCGGGCGTTTTTTGCATTGCCGCTGTTAAGCAATGATAAAGGTGTTCATA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 51 CCGGGCGTTTTTTGCATTGCCGCTGTTAAGCAATGATAAAGGTGTTCATA 100
BSNT_04247___ 101 CGAATGCTGTATACGGCTTTGCGATGATTTTGATGAAAATGCTTGAGGAT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 101 CGAATGCTGTATACGGCTTTGCGATGATTTTGATGAAAATGCTTGAGGAT 150
BSNT_04247___ 151 GAAAAACCGACGCACATGCTGGTTGCGTTTGATGCCGGGAAAACAACATT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 151 GAAAAACCGACGCACATGCTGGTTGCGTTTGATGCCGGGAAAACAACATT 200
BSNT_04247___ 201 TCGTCACGGCACATTTAAAGAATATAAAGGCGGCAGACAGAAAACCCCGC 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 201 TCGTCACGGCACATTTAAAGAATATAAAGGCGGCAGACAGAAAACCCCGC 250
BSNT_04247___ 251 CTGAGCTTTCCGAACAAATGCCGTTTATCCGCGAGCTGCTGGATGCCTAC 300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 251 CTGAGCTTTCCGAACAAATGCCGTTTATCCGCGAGCTGCTGGATGCCTAC 300
BSNT_04247___ 301 CAGATCAGCCGCTATGAACTGGAACAATATGAAGCGGATGATATTATCGG 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 301 CAGATCAGCCGCTATGAACTGGAACAATATGAAGCGGATGATATTATCGG 350
BSNT_04247___ 351 CACACTGGCCAAATCGGCTGAAAAAGACGGATTTGAAGTAAAGGTTTTCT 400
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU29090___po 351 CACACTGGCCAAATCGGCTGAAAAAGACGGATTTGAAGTTAAGGTTTTCT 400
BSNT_04247___ 401 CAGGGGATAAGGATTTAACCCAGCTGGCAACGGACAAAACGACAGTTGCC 450
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 401 CAGGAGATAAGGATTTAACCCAGCTGGCAACGGACAAAACGACAGTTGCC 450
BSNT_04247___ 451 ATTACGAGAAAGGGAATTACCGATGTTGAATTTTACACACCGGAGCATGT 500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 451 ATTACGAGAAAGGGAATTACCGATGTTGAATTTTACACACCGGAGCATGT 500
BSNT_04247___ 501 CAAAGAGAAATATGGGCTTACGCCTGAACAAATCATTGACATGAAGGGTC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 501 CAAAGAGAAATATGGGCTTACGCCTGAACAAATCATTGACATGAAGGGTC 550
BSNT_04247___ 551 TGATGGGCGATTCCTCAGATAATATTCCGGGTGTGCCCGGCGTCGGAGAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 551 TGATGGGCGATTCCTCAGATAATATTCCGGGTGTGCCCGGCGTCGGAGAA 600
BSNT_04247___ 601 AAGACTGCGATTAAGCTTTTAAAACAATTTGATTCCGTTGAAAAGCTGCT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 601 AAGACTGCGATTAAGCTTTTAAAACAATTTGATTCCGTTGAAAAGCTGCT 650
BSNT_04247___ 651 GGAGTCCATTGACGAGGTGAGCGGAAAGAAATTGAAGGAAAAGCTTGAGG 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 651 GGAGTCCATTGACGAGGTGAGCGGAAAGAAATTGAAGGAAAAGCTTGAGG 700
BSNT_04247___ 701 AGTTTAAGGATCAGGCATTGATGAGCAAGGAGCTTGCGACAATTATGACG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 701 AGTTTAAGGATCAGGCATTGATGAGCAAGGAGCTTGCGACAATTATGACG 750
BSNT_04247___ 751 GATGCTCCGATTGAGGTATCTGTTTCCGCCCTGGAATATCAAGGCTTTAA 800
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU29090___po 751 GATGCTCCGATTGAGGTATCTGTTTCCGGCCTGGAATATCAAGGCTTTAA 800
BSNT_04247___ 801 TCGTGAACAGGTCATTGCCATCTTTAAAGATCTTGGCTTCAACACGCTTC 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 801 TCGTGAACAGGTCATTGCCATCTTTAAAGATCTTGGCTTCAACACGCTTC 850
BSNT_04247___ 851 TTGAACGGCTTGGAGAAGACAGTGCAGAAGCAGAACAGGATCAATCGTTG 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 851 TTGAACGGCTTGGAGAAGACAGTGCAGAAGCAGAACAGGATCAATCGTTG 900
BSNT_04247___ 901 GAAGACATTAATGTCAAAACAGTCACAGACGTGACAAGCGATATATTGGT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 901 GAAGACATTAATGTCAAAACAGTCACAGACGTGACAAGCGATATATTGGT 950
BSNT_04247___ 951 TTCTCCATCCGCATTTGTCGTTGAACAGATTGGCGATAATTATCATGAAG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 951 TTCTCCATCCGCATTTGTCGTTGAACAGATTGGCGATAATTATCATGAAG 1000
BSNT_04247___ 1001 AGCCGATTCTCGGATTTTCGATCGTAAATGAAACGGGAGCTTATTTCATT 1050
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1001 AGCCGATCCTCGGATTTTCGATCGTAAATGAAACGGGAGCTTATTTCATT 1050
BSNT_04247___ 1051 CCGAAAGACACTGCCGTTGAGTCTGAGGTGTTTAAAGAATGGGTGGAAAA 1100
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU29090___po 1051 CCGAAAGACATTGCCGTTGAGTCTGAGGTGTTTAAAGAATGGGTGGAAAA 1100
BSNT_04247___ 1101 TGACGATCAGAAGAAATGGGTCTTCGACAGCAAGCGGGCTGTTGTCGCTT 1150
||||||.||||||||||||||||||||||||||||||||.||||||||||
BSU29090___po 1101 TGACGAGCAGAAGAAATGGGTCTTCGACAGCAAGCGGGCCGTTGTCGCTT 1150
BSNT_04247___ 1151 TGCGCTGGCAGGGCATTGAGCTGAAAGGAGCCGAGTTTGATACGCTCCTT 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1151 TGCGCTGGCAGGGCATTGAGCTGAAAGGAGCCGAGTTTGATACGCTCCTT 1200
BSNT_04247___ 1201 GCGGCTTATATCATCAACCCGGGCAATTCATATGACGACGTTGCGAGTGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1201 GCGGCTTATATCATCAACCCGGGCAATTCATATGACGACGTTGCGAGTGT 1250
BSNT_04247___ 1251 GGCTAAGGATTACGGCCTGCATATCGTTTCAAGTGATGAATCAGTTTATG 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1251 GGCTAAGGATTACGGCCTGCATATCGTTTCAAGTGATGAATCAGTTTATG 1300
BSNT_04247___ 1301 GAAAAGGAGCAAAACGGGCAGTGCCGTCAGAAGACGTACTGTCTGAGCAC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1301 GAAAAGGAGCAAAACGGGCAGTGCCGTCAGAAGACGTACTGTCTGAGCAC 1350
BSNT_04247___ 1351 CTTGGCCGAAAAGCGTTAGCGATTCAAAGCCTTCGGGAAAAGCTCGTTCA 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1351 CTTGGCCGAAAAGCGTTAGCGATTCAAAGCCTTCGGGAAAAGCTCGTTCA 1400
BSNT_04247___ 1401 AGAGCTGGAAAACAACGACCAGCTTGAACTGTTTGAAGAGCTGGAAATGC 1450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1401 AGAGCTGGAAAACAACGACCAGCTTGAACTGTTTGAAGAGCTGGAAATGC 1450
BSNT_04247___ 1451 CTCTTGCGCTTATTCTTGGCGAAATGGAATCAACTGGCGTCAAGGTCGAT 1500
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1451 CTCTTGCGCTTATTCTTGGCGAAATGGAATCAACTGGCGTCAAGGTCGAT 1500
BSNT_04247___ 1501 GTTGACCGTTTAAAACGGATGGGTGAAGAACTGGGTGCGAAGCTGAAGGA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1501 GTTGACCGTTTAAAACGGATGGGTGAAGAACTGGGTGCGAAGCTGAAGGA 1550
BSNT_04247___ 1551 ATATGAAGAAAAAATCCATGAGATTGCGGGAGAGCCGTTTAACATCAATT 1600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1551 ATATGAAGAAAAAATCCATGAGATTGCGGGAGAGCCGTTTAACATCAATT 1600
BSNT_04247___ 1601 CTCCGAAACAGCTAGGCGTCATCTTATTTGAAAAGATCGGCCTTCCTGTC 1650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1601 CTCCGAAACAGCTAGGCGTCATCTTATTTGAAAAGATCGGCCTTCCTGTC 1650
BSNT_04247___ 1651 GTAAAGAAAACGAAAACAGGCTATTCTACGTCTGCCGATGTGCTTGAAAA 1700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1651 GTAAAGAAAACGAAAACAGGCTATTCTACGTCTGCCGATGTGCTTGAAAA 1700
BSNT_04247___ 1701 GCTGGCTGACAAGCATGATATTGTCGACTATATTTTACAGTACAGACAAA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1701 GCTGGCTGACAAGCATGATATTGTCGACTATATTTTACAGTACAGACAAA 1750
BSNT_04247___ 1751 TTGGCAAGCTTCAATCAACATATATCGAAGGGCTTTTAAAGGTGACGAGA 1800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1751 TTGGCAAGCTTCAATCAACATATATCGAAGGGCTTTTAAAGGTGACGAGA 1800
BSNT_04247___ 1801 CCGGATTCGCATAAAGTGCACACGCGATTTAACCAGGCCTTAACGCAAAC 1850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1801 CCGGATTCGCATAAAGTGCACACGCGATTTAACCAGGCCTTAACGCAAAC 1850
BSNT_04247___ 1851 TGGCCGTCTCAGCTCGACTGATCCGAACCTGCAAAACATTCCGATCAGGC 1900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1851 TGGCCGTCTCAGCTCGACTGATCCGAACCTGCAAAACATTCCGATCAGGC 1900
BSNT_04247___ 1901 TTGAGGAAGGGCGGAAAATTCGCCAAGCTTTTGTGCCGTCTGAAAAAGAC 1950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1901 TTGAGGAAGGGCGGAAAATTCGCCAAGCTTTTGTGCCGTCTGAAAAAGAC 1950
BSNT_04247___ 1951 TGGCTCATTTTTGCAGCCGATTATTCACAAATCGAGCTGCGGGTGCTTGC 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 1951 TGGCTCATTTTTGCAGCCGATTATTCACAAATCGAGCTGCGGGTGCTTGC 2000
BSNT_04247___ 2001 CCATATTTCAAAGGATGAAAATCTGATCGAAGCTTTTACAAATGATATGG 2050
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU29090___po 2001 CCATATTTCAAAGGATGAAAATCTGATCGAAGCTTTTACTAATGATATGG 2050
BSNT_04247___ 2051 ATATTCACACGAAAACGGCAATGGATGTGTTCCATGTCGCTAAGGATGAA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2051 ATATTCACACGAAAACGGCAATGGATGTGTTCCATGTCGCTAAGGATGAA 2100
BSNT_04247___ 2101 GTGACATCTGCGATGAGACGCCAGGCGAAAGCGGTCAACTTTGGGATTGT 2150
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU29090___po 2101 GTGACATCTGCGATGAGACGCCAGGCGAAAGCGGTCAACTTTGGCATTGT 2150
BSNT_04247___ 2151 TTACGGGATCAGCGATTACGGTCTGTCACAGAACCTCGGCATTACCCGGA 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2151 TTACGGGATCAGCGATTACGGTCTGTCACAGAACCTCGGCATTACCCGGA 2200
BSNT_04247___ 2201 AGGAAGCAGGAGCATTTATCGACCGCTATCTGGAAAGCTTCCAAGGCGTA 2250
|||||||.||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2201 AGGAAGCGGGAGCATTTATCGACCGCTATCTGGAAAGCTTCCAAGGCGTA 2250
BSNT_04247___ 2251 AAAGCGTACATGGAAGATTCAGTACAGGAAGCGAAACAAAAAGGATACGT 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2251 AAAGCGTACATGGAAGATTCAGTACAGGAAGCGAAACAAAAAGGATACGT 2300
BSNT_04247___ 2301 AACAACGCTTATGCATCGCCGCCGCTACATCCCTGAGCTGACGAGCCGGA 2350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2301 AACAACGCTTATGCATCGCCGCCGCTACATCCCTGAGCTGACGAGCCGGA 2350
BSNT_04247___ 2351 ACTTTAATATCCGAAGTTTTGCGGAGCGGACGGCCATGAATACGCCGATT 2400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2351 ACTTTAATATCCGAAGTTTTGCGGAGCGGACGGCCATGAATACGCCGATT 2400
BSNT_04247___ 2401 CAAGGAAGCGCCGCTGATATTATCAAAAAAGCCATGATTGACATGGCTGC 2450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2401 CAAGGAAGCGCCGCTGATATTATCAAAAAAGCCATGATTGACATGGCTGC 2450
BSNT_04247___ 2451 CAAGCTGAAAGAAAAACAGTTGAAAGCAAGGCTTCTACTTCAAGTACACG 2500
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU29090___po 2451 CAAGCTGAAAGAAAAACAGTTGAAAGCAAGGCTTCTGCTTCAAGTACACG 2500
BSNT_04247___ 2501 ATGAATTGATTTTTGAGGCGCCAAAGGAAGAAATTGAAATTCTTGAAAAG 2550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2501 ATGAATTGATTTTTGAGGCGCCAAAGGAAGAAATTGAAATTCTTGAAAAG 2550
BSNT_04247___ 2551 CTTGTTCCTGAAGTGATGGAGCATGCGCTTGCATTAGATGTGCCGTTAAA 2600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2551 CTTGTTCCTGAAGTGATGGAGCATGCGCTTGCATTAGATGTGCCGTTAAA 2600
BSNT_04247___ 2601 GGTGGACTTTGCATCAGGCCCATCTTGGTACGATGCGAAATAA 2643
|||||||||||||||||||||||||||||||||||||||||||
BSU29090___po 2601 GGTGGACTTTGCATCAGGCCCATCTTGGTACGATGCGAAATAA 2643
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.