Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04238 and BSU29020

See Amino acid alignment / Visit BSNT_04238 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:43
# Commandline: needle
#    -asequence dna-align/BSNT_04238___gapB.1.22522.seq
#    -bsequence dna-align/BSU29020___gapB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04238___gapB-BSU29020___gapB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04238___gapB-BSU29020___gapB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04238___gapB
# 2: BSU29020___gapB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1023
# Identity:    1023/1023 (100.0%)
# Similarity:  1023/1023 (100.0%)
# Gaps:           0/1023 ( 0.0%)
# Score: 5115.0
# 
#
#=======================================

BSNT_04238___      1 ATGAAGGTAAAAGTAGCGATCAACGGGTTTGGAAGAATCGGAAGAATGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga      1 ATGAAGGTAAAAGTAGCGATCAACGGGTTTGGAAGAATCGGAAGAATGGT     50

BSNT_04238___     51 TTTTAGAAAAGCGATGTTAGACGATCAAATTCAAGTAGTGGCCATTAACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga     51 TTTTAGAAAAGCGATGTTAGACGATCAAATTCAAGTAGTGGCCATTAACG    100

BSNT_04238___    101 CCAGCTATTCCGCAGAAACGCTGGCTCATTTAATAAAGTATGACACAATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    101 CCAGCTATTCCGCAGAAACGCTGGCTCATTTAATAAAGTATGACACAATT    150

BSNT_04238___    151 CACGGCAGATACGACAAAGAGGTTGTGGCTGGTGAAGATAGCCTGATCGT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    151 CACGGCAGATACGACAAAGAGGTTGTGGCTGGTGAAGATAGCCTGATCGT    200

BSNT_04238___    201 AAATGGAAAGAAAGTGCTTTTGTTAAACAGCCGTGATCCAAAACAGCTGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    201 AAATGGAAAGAAAGTGCTTTTGTTAAACAGCCGTGATCCAAAACAGCTGC    250

BSNT_04238___    251 CTTGGCGGGAATATGATATTGACATAGTCGTCGAAGCAACAGGGAAGTTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    251 CTTGGCGGGAATATGATATTGACATAGTCGTCGAAGCAACAGGGAAGTTT    300

BSNT_04238___    301 AATGCTAAAGATAAAGCGATGGGCCATATAGAAGCAGGTGCAAAAAAAGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    301 AATGCTAAAGATAAAGCGATGGGCCATATAGAAGCAGGTGCAAAAAAAGT    350

BSNT_04238___    351 GATTTTGACCGCTCCGGGAAAAAATGAAGACGTTACCATTGTGATGGGCG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    351 GATTTTGACCGCTCCGGGAAAAAATGAAGACGTTACCATTGTGATGGGCG    400

BSNT_04238___    401 TAAATGAGGACCAATTCGACGCTGAGCGCCATGTCATTATTTCAAATGCG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    401 TAAATGAGGACCAATTCGACGCTGAGCGCCATGTCATTATTTCAAATGCG    450

BSNT_04238___    451 TCATGCACGACAAATTGCCTTGCGCCTGTTGTAAAAGTGCTGGATGAAGA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    451 TCATGCACGACAAATTGCCTTGCGCCTGTTGTAAAAGTGCTGGATGAAGA    500

BSNT_04238___    501 GTTTGGCATTGAGAGCGGTCTGATGACTACAGTTCATGCGTATACGAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    501 GTTTGGCATTGAGAGCGGTCTGATGACTACAGTTCATGCGTATACGAATG    550

BSNT_04238___    551 ACCAAAAAAATATTGATAACCCGCACAAAGATTTGCGCCGGGCGCGGGCT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    551 ACCAAAAAAATATTGATAACCCGCACAAAGATTTGCGCCGGGCGCGGGCT    600

BSNT_04238___    601 TGCGGTGAATCCATCATTCCAACAACAACAGGAGCGGCAAAGGCGCTTTC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    601 TGCGGTGAATCCATCATTCCAACAACAACAGGAGCGGCAAAGGCGCTTTC    650

BSNT_04238___    651 GCTTGTGCTGCCGCATCTGAAAGGAAAACTTCACGGCCTCGCCTTGCGTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    651 GCTTGTGCTGCCGCATCTGAAAGGAAAACTTCACGGCCTCGCCTTGCGTG    700

BSNT_04238___    701 TCCCTGTTCCGAACGTCTCATTGGTTGATCTCGTTGTTGATCTGAAAACG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    701 TCCCTGTTCCGAACGTCTCATTGGTTGATCTCGTTGTTGATCTGAAAACG    750

BSNT_04238___    751 GATGTTACGGCTGAAGAAGTAAACGAGGCATTTAAACGCGCTGCCAAAAC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    751 GATGTTACGGCTGAAGAAGTAAACGAGGCATTTAAACGCGCTGCCAAAAC    800

BSNT_04238___    801 GTCGATGTACGGTGTACTTGATTACTCAGATGAACCGCTCGTTTCGACTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    801 GTCGATGTACGGTGTACTTGATTACTCAGATGAACCGCTCGTTTCGACTG    850

BSNT_04238___    851 ATTATAATACGAATCCGCATTCAGCGGTCATTGACGGGCTTACAACAATG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    851 ATTATAATACGAATCCGCATTCAGCGGTCATTGACGGGCTTACAACAATG    900

BSNT_04238___    901 GTAATGGAAGACAGGAAAGTAAAGGTGCTGGCGTGGTATGACAACGAATG    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    901 GTAATGGAAGACAGGAAAGTAAAGGTGCTGGCGTGGTATGACAACGAATG    950

BSNT_04238___    951 GGGCTACTCCTGCAGAGTTGTTGATCTAATCCGCCATGTAGCGGCACGAA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU29020___ga    951 GGGCTACTCCTGCAGAGTTGTTGATCTAATCCGCCATGTAGCGGCACGAA   1000

BSNT_04238___   1001 TGAAACATCCGTCTGCTGTATAA   1023
                     |||||||||||||||||||||||
BSU29020___ga   1001 TGAAACATCCGTCTGCTGTATAA   1023


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04238 and BSU29020

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
