Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04231 and BSU28980

See Amino acid alignment / Visit BSNT_04231 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence dna-align/BSNT_04231___dnaI.1.22522.seq
#    -bsequence dna-align/BSU28980___dnaI.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04231___dnaI-BSU28980___dnaI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04231___dnaI-BSU28980___dnaI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04231___dnaI
# 2: BSU28980___dnaI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 936
# Identity:     922/936 (98.5%)
# Similarity:   922/936 (98.5%)
# Gaps:           0/936 ( 0.0%)
# Score: 4554.0
# 
#
#=======================================

BSNT_04231___      1 ATGGAACCAATCGGCCGTTCTCTGCAGGGCGTAACCGGCAGGCCGGATTT     50
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU28980___dn      1 ATGGAACCAATCGGCCGTTCCCTGCAGGGCGTAACCGGCAGGCCGGATTT     50

BSNT_04231___     51 CCAAAAACGTCTTGAACAAATGAAGGAAAAAGTCATGAAAGATCAAGATG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn     51 CCAAAAACGTCTTGAACAAATGAAGGAAAAAGTCATGAAAGATCAAGATG    100

BSNT_04231___    101 TTCAAGCATTTTTGAAGGAAAACGAAGAAGTGATTGACCAAAAAATGATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    101 TTCAAGCATTTTTGAAGGAAAACGAAGAAGTGATTGACCAAAAAATGATC    150

BSNT_04231___    151 GAAAAGAGCTTAAATAAGCTTTATGAATATATCGAACAAAGCAAGAATTG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    151 GAAAAGAGCTTAAATAAGCTTTATGAATATATCGAACAAAGCAAGAATTG    200

BSNT_04231___    201 CTCCTATTGTTCGGAAGATGAAAACTGCAACAATTTGTTGGAGGGCTACC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    201 CTCCTATTGTTCGGAAGATGAAAACTGCAACAATTTGTTGGAGGGCTACC    250

BSNT_04231___    251 ATCCGAAGCTTGTTGTCAATGGGAGGTCTATTGATATCGAGTATTACGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    251 ATCCGAAGCTTGTTGTCAATGGGAGGTCTATTGATATCGAGTATTACGAA    300

BSNT_04231___    301 TGTCCAGTCAAACGGAAGCTCGACCAGCAGAAGAAACAAAAGTCTCTTAT    350
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU28980___dn    301 TGTCCAGTCAAACGGAAGCTCGACCAGCAGAAGAAACAACAGTCTCTTAT    350

BSNT_04231___    351 GAAAAGCATGTATATCCAGCAGGATCTTCTCGGAGCGACGTTCCAGCAAG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU28980___dn    351 GAAAAGCATGTATATCCAGCAGGATCTTCTTGGAGCGACGTTCCAGCAAG    400

BSNT_04231___    401 TTGATATCAGTGACCCGAGCAGGCTCGCGATGTTTCAGCATGTTACAGAC    450
                     ||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU28980___dn    401 TTGATATCAGTGACCCAAGCAGACTCGCGATGTTTCAGCATGTTACAGAC    450

BSNT_04231___    451 TTCCTGAAAAGCTATAATGAGACGGGAAAAGGGAAAGGATTATATTTATA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    451 TTCCTGAAAAGCTATAATGAGACGGGAAAAGGGAAAGGATTATATTTATA    500

BSNT_04231___    501 CGGGAAATTCGGGGTAGGAAAAACGTTTATGCTCGCTGCGATTGCCAATG    550
                     |||||||||.|||||||||||||||||||||||||||||.||||||||||
BSU28980___dn    501 CGGGAAATTTGGGGTAGGAAAAACGTTTATGCTCGCTGCAATTGCCAATG    550

BSNT_04231___    551 AGCTGGCGGAAAAAGAGTATTCCTCCATGATTGTCTATGTGCCTGAATTT    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU28980___dn    551 AGCTGGCGGAAAAAGAGTATTCCTCCATGATTGTTTATGTGCCTGAATTT    600

BSNT_04231___    601 GTGAGAGAGCTTAAGAATTCGCTGCAAGACCAGACATTGGAAGAGAAGCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    601 GTGAGAGAGCTTAAGAATTCGCTGCAAGACCAGACATTGGAAGAGAAGCT    650

BSNT_04231___    651 CAATATGGTAAAGACCACACCCGTATTGATGCTTGATGACATCGGAGCAG    700
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU28980___dn    651 CAATATGGTAAAGACCACACCCGTATTAATGCTTGATGACATCGGAGCAG    700

BSNT_04231___    701 AATCAATGACAAGCTGGGTAAGGGATGAAGTCATCGGAACGGTGCTTCAA    750
                     ||||||||||||||||||||||||||||.||||||||||||||||||||.
BSU28980___dn    701 AATCAATGACAAGCTGGGTAAGGGATGAGGTCATCGGAACGGTGCTTCAG    750

BSNT_04231___    751 CACAGAATGTCCCAGCAGCTGCCTACTTTCTTTTCTTCTAATTTCTCACC    800
                     |||||||||||||||||||||||.||.|||||||||||||||||||||||
BSU28980___dn    751 CACAGAATGTCCCAGCAGCTGCCAACGTTCTTTTCTTCTAATTTCTCACC    800

BSNT_04231___    801 TGACGAGCTGAAGCATCATTTTACGTATTCGCAGAGGGGAGAAAAAGAAG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    801 TGACGAGCTGAAGCATCATTTTACGTATTCGCAGAGGGGAGAAAAAGAAG    850

BSNT_04231___    851 AAGTAAAAGCTGCAAGATTAATGGAGCGGATATTATATTTGGCTGCTCCG    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28980___dn    851 AAGTAAAAGCTGCAAGATTAATGGAGCGGATATTATATTTGGCTGCTCCG    900

BSNT_04231___    901 ATCCGCCTTGACGGAGAAAACCGCCGCCATCCATAA    936
                     ||||||||||||||||||||||||||.|||||||||
BSU28980___dn    901 ATCCGCCTTGACGGAGAAAACCGCCGACATCCATAA    936


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