Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04227 and BSU28960

See Amino acid alignment / Visit BSNT_04227 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:42
# Commandline: needle
#    -asequence dna-align/BSNT_04227___ytxC.1.22522.seq
#    -bsequence dna-align/BSU28960___ytxC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04227___ytxC-BSU28960___ytxC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04227___ytxC-BSU28960___ytxC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04227___ytxC
# 2: BSU28960___ytxC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     836/846 (98.8%)
# Similarity:   836/846 (98.8%)
# Gaps:           0/846 ( 0.0%)
# Score: 4140.0
# 
#
#=======================================

BSNT_04227___      1 ATGCTTGAAATAATCTTTGAAGATGACCATGATGCAGCCGCTTTTTTACA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt      1 ATGCTTGAAATAATCTTTGAAGATGACCATGATGCAGCCGCTTTTTTACA     50

BSNT_04227___     51 TCTCATTCAGCATTCGGACGATCGGAACAATATCATTGTCCATGAAGGCA    100
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28960___yt     51 TCTCATTCAGCATTCGGACGATCGGAACAATATCATTGTCCGTGAAGGCA    100

BSNT_04227___    101 TACGAAAAATCGGGATTGAAAAAGCGAATCCGGCTTTTCCTATTCAGCGT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    101 TACGAAAAATCGGGATTGAAAAAGCGAATCCGGCTTTTCCTATTCAGCGT    150

BSNT_04227___    151 TTTATGGAGCCGATTCTGGTCAAATTTTTTTTGGAATGCAAAGAAGACGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    151 TTTATGGAGCCGATTCTGGTCAAATTTTTTTTGGAATGCAAAGAAGACGA    200

BSNT_04227___    201 GCATATGCTGTCATTGATTGAGGAAACTTATTGTTTCACGGACCAGGATG    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU28960___yt    201 GCATATGCTGTCATTGATTGAGGAAACGTATTGTTTCACGGACCAGGATG    250

BSNT_04227___    251 AACAGCAGCAAATCCTTCAGCTCGCACACAGTATTATTGAAGGTGAAGCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    251 AACAGCAGCAAATCCTTCAGCTCGCACACAGTATTATTGAAGGTGAAGCA    300

BSNT_04227___    301 GCCGATCTTCCGTTTGAGCCGCTGAAGCTTTCACGGAAACAATCTATTTT    350
                     |.||||||||||||||||||||||||||||||||||||||||||.|||||
BSU28960___yt    301 GACGATCTTCCGTTTGAGCCGCTGAAGCTTTCACGGAAACAATCAATTTT    350

BSNT_04227___    351 GGATGAACTCCAAACGATCTGTTTAGAGGAAGGAGTATTTTACATTCGCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    351 GGATGAACTCCAAACGATCTGTTTAGAGGAAGGAGTATTTTACATTCGCT    400

BSNT_04227___    401 CCTTTCAGACCTTCCGACTTGGATCATACTATAAGCAGCTGAGAGATATT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    401 CCTTTCAGACCTTCCGACTTGGATCATACTATAAGCAGCTGAGAGATATT    450

BSNT_04227___    451 ACAGAAGCAGCGATTGATGAATATAAGATGGAACAGGAATATCAAAACTT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    451 ACAGAAGCAGCGATTGATGAATATAAGATGGAACAGGAATATCAAAACTT    500

BSNT_04227___    501 TATTCAAACACTCAGAGACTATGTAAACGCCAAACAGCCGCGAATCAAAA    550
                     ||||||||||||||||||||||||..||||||||||||||||||||||||
BSU28960___yt    501 TATTCAAACACTCAGAGACTATGTGGACGCCAAACAGCCGCGAATCAAAA    550

BSNT_04227___    551 AAGTGCATATTGTCCATGATGGTTCCTTTACATTATGGGAGCTGCGCTAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    551 AAGTGCATATTGTCCATGATGGTTCCTTTACATTATGGGAGCTGCGCTAT    600

BSNT_04227___    601 GTGCCGGAACGGGAAAAAATGAAATACATAGACAGGAGATTTGTCCGGGA    650
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU28960___yt    601 GTGCCGGAACGGGAAAAAATGAAATACATAGACAGAAGATTTGTCCGGGA    650

BSNT_04227___    651 TCATCCTATGTATATTGATTCTCATTTGCTCGCGCCGCTGATTTCCATTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    651 TCATCCTATGTATATTGATTCTCATTTGCTCGCGCCGCTGATTTCCATTG    700

BSNT_04227___    701 CGCCTGATGAAGTCGTGCTTTATACCGACCAGCCCGAGCACATGATGGCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28960___yt    701 CGCCTGATGAAGTCGTGCTTTATACCGACCAGCCCGAGCACATGATGGCA    750

BSNT_04227___    751 AGGACCATTCAAAACGTATTTCAAGAGAGAGTGGAAATGCTTCCGCTGCA    800
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28960___yt    751 AGGACCATTCAAAACGTATTTCAAGAGAGAGTGGAAATGCTCCCGCTGCA    800

BSNT_04227___    801 TGCTTTTACAGATGCAGAAATACCGGTGAAGCAATCGAAAGGATGA    846
                     |||||||||||||||||||||||||||||||||.|||.||||||||
BSU28960___yt    801 TGCTTTTACAGATGCAGAAATACCGGTGAAGCACTCGGAAGGATGA    846


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