Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04215 and BSU28890
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_04215___yscB.1.22522.seq
# -bsequence dna-align/BSU28890___yscB.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04215___yscB-BSU28890___yscB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04215___yscB-BSU28890___yscB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04215___yscB
# 2: BSU28890___yscB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 666
# Identity: 615/666 (92.3%)
# Similarity: 615/666 (92.3%)
# Gaps: 36/666 ( 5.4%)
# Score: 2978.0
#
#
#=======================================
BSNT_04215___ 1 ATGAACAAACTGATACAGCTTGCTTTATTTTTCACATTGATATTAACCGG 50
|||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28890___ys 1 ATGAACAAACTGATACAGCTTGCTTTATTTTTCACATTGATGTTAACCGG 50
BSNT_04215___ 51 TTGCACGAATAGCAGCGCATCTTCCGAACCAAAAGCTGAA---ACTGTTA 97
||||.|||||||||||.|||||||||||.||||||..||| |||||||
BSU28890___ys 51 TTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTA 100
BSNT_04215___ 98 AGACAGCTGCAGCATTTCCTCAAAAGGGGCTGGAGAAAGAGCTAAAAAAA 147
|||||.|.|||||||||||||||||||.||||||||||||||||||||||
BSU28890___ys 101 AGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCTAAAAAAA 150
BSNT_04215___ 148 CTAAAACCCGTTTCATTGGACATGAAGTTCGAGAGTCCACTTGCTACTGA 197
|||||||||||||||||||||||||||||||||||||||||.|||||.||
BSU28890___ys 151 CTAAAACCCGTTTCATTGGACATGAAGTTCGAGAGTCCACTCGCTACCGA 200
BSNT_04215___ 198 GTTAGGAAAGCGGAAGGCAAAAGAAGAAGCTGAAAAGCAAAGACAAATCG 247
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU28890___ys 201 GTTAGGAAAGCGGAAGGCAAAAGAGGAAGCTGAAAAGCAAAGACAAATCG 250
BSNT_04215___ 248 CTGCCGAGAAAAAGCTTGAAAAAGAGCGGGAGGCGAAACGAAAGAAACAG 297
|.||.|||||||||||||||||||||||||||||||||||||||||||||
BSU28890___ys 251 CCGCTGAGAAAAAGCTTGAAAAAGAGCGGGAGGCGAAACGAAAGAAACAG 300
BSNT_04215___ 298 CAGGAGGAAAAAGCG---------------------------------GA 314
||||||||||||||| ||
BSU28890___ys 301 CAGGAGGAAAAAGCGGAGAGACAGCGATTAGCAGAGCAGCAGGCTGCAGA 350
BSNT_04215___ 315 GAGACAGCGATTAGCCGAAGCGGAAAGACAAGCTGAACTTGAAAGACAGC 364
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28890___ys 351 GAGACAGCGATTAGCCGAAGCGGAAAGACAAGCTGAACTTGAAAGACAGC 400
BSNT_04215___ 365 GGCAGGCAGCAATCCAAAAAGAGCAGAAAGCGAACGCTGAGAAAAAGCGG 414
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28890___ys 401 GGCAGGCAGCAATCCAAAAAGAGCAGAAAGCGAACGCTGAGAAAAAGCGG 450
BSNT_04215___ 415 CAATCGCAGGCACAACGGCAGCAGACTGAGGCACCCCCATCTAATAGTCA 464
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU28890___ys 451 CAATCGCAGGCACAACGGCAGCAGACTGAGGCACCCTCATCTAATAGTCA 500
BSNT_04215___ 465 AGATCCACCATCTTCCTCGAGTCAGACAGATAAAACCATTCAACAGCCAG 514
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28890___ys 501 AGATCCACCATCTTCCTCGAGTCAGACAGATAAAACCATTCAACAGCCAG 550
BSNT_04215___ 515 CTTCAGAGCTTCCTGATGACGATGGTTATGGTTATGAAGAACGAAAAAAG 564
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28890___ys 551 CTTCAGAGCTTCCTGATGACGATGGTTATGGTTATGAAGAACGAAAAAAG 600
BSNT_04215___ 565 TGGCATGACGATCAAGTAGAATGGGGCATTAAACAAGGGTATATCGATCC 614
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28890___ys 601 TGGCATGACGATCAAGTAGAATGGGGCATTAAACAAGGGTATATCGATCC 650
BSNT_04215___ 615 CGAAGACGCACCATAA 630
||||||||||||||||
BSU28890___ys 651 CGAAGACGCACCATAA 666
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