Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04214 and BSU28870

See Amino acid alignment / Visit BSNT_04214 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence dna-align/BSNT_04214___infC.1.22522.seq
#    -bsequence dna-align/BSU28870___infC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04214___infC-BSU28870___infC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04214___infC-BSU28870___infC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04214___infC
# 2: BSU28870___infC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 522
# Identity:     504/522 (96.6%)
# Similarity:   504/522 (96.6%)
# Gaps:          18/522 ( 3.4%)
# Score: 2520.0
# 
#
#=======================================

BSNT_04214___      1 ------------------TTGGTTAATGAGGGTATCCGTGCACGTGAGGT     32
                                       ||||||||||||||||||||||||||||||||
BSU28870___in      1 ATTATTAGCAAAGATCAATTGGTTAATGAGGGTATCCGTGCACGTGAGGT     50

BSNT_04214___     33 CCGTTTAATCGGACAAAATGGCGACCAGCTTGGAATCAAGTCCCGTCAGG     82
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in     51 CCGTTTAATCGGACAAAATGGCGACCAGCTTGGAATCAAGTCCCGTCAGG    100

BSNT_04214___     83 AAGCACTTGAAATCGCCGGCCGCGCAAATCTTGACCTTGTGTTAGTTGCA    132
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    101 AAGCACTTGAAATCGCCGGCCGCGCAAATCTTGACCTTGTGTTAGTTGCA    150

BSNT_04214___    133 GCGAATGCAAAACCGCCTGTCTGCCGAATCATGGACTACGGTAAGTTCCG    182
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    151 GCGAATGCAAAACCGCCTGTCTGCCGAATCATGGACTACGGTAAGTTCCG    200

BSNT_04214___    183 ATTTGAGCAGCAGAAAAAGGAAAAAGAAGCACGCAAGAATCAAAAAATCA    232
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    201 ATTTGAGCAGCAGAAAAAGGAAAAAGAAGCACGCAAGAATCAAAAAATCA    250

BSNT_04214___    233 TTAACTTAAAAGAAGTTCGGTTAAGTCCGACAATCGATGAGCATGACTTT    282
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    251 TTAACTTAAAAGAAGTTCGGTTAAGTCCGACAATCGATGAGCATGACTTT    300

BSNT_04214___    283 AACACGAAATTGCGCAATGCGATTAAATTCCTTGAAAAAGGCGATAAAGT    332
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    301 AACACGAAATTGCGCAATGCGATTAAATTCCTTGAAAAAGGCGATAAAGT    350

BSNT_04214___    333 GAAAGCTTCTATCCGCTTTAAAGGACGCGCAATCACTCATAAAGAAATCG    382
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    351 GAAAGCTTCTATCCGCTTTAAAGGACGCGCAATCACTCATAAAGAAATCG    400

BSNT_04214___    383 GTCAGCGTGTATTAGACCGTTTCTCCGAAGCATGTGCTGAGGTTGCGACA    432
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    401 GTCAGCGTGTATTAGACCGTTTCTCCGAAGCATGTGCTGAGGTTGCGACA    450

BSNT_04214___    433 GTCGAAACAAAACCAAAAATGGACGGCCGCAGCATGTTCTTAATGCTCGC    482
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28870___in    451 GTCGAAACAAAACCAAAAATGGACGGCCGCAGCATGTTCTTAATGCTCGC    500

BSNT_04214___    483 ACCGAAAAACGAAAAGCAATAA    504
                     ||||||||||||||||||||||
BSU28870___in    501 ACCGAAAAACGAAAAGCAATAA    522


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