Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04210 and BSU28840

See Amino acid alignment / Visit BSNT_04210 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence dna-align/BSNT_04210___ysdA.1.22522.seq
#    -bsequence dna-align/BSU28840___ysdA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04210___ysdA-BSU28840___ysdA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04210___ysdA-BSU28840___ysdA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04210___ysdA
# 2: BSU28840___ysdA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 270
# Identity:     265/270 (98.1%)
# Similarity:   265/270 (98.1%)
# Gaps:           0/270 ( 0.0%)
# Score: 1305.0
# 
#
#=======================================

BSNT_04210___      1 ATGATTATTGCAGCTTATTTGTTATTGATTAATCTGTGCGGTTTTTGGGT     50
                     |||||||||||.|||||||||.|.||||||||||||||||||||||||||
BSU28840___ys      1 ATGATTATTGCTGCTTATTTGGTGTTGATTAATCTGTGCGGTTTTTGGGT     50

BSNT_04210___     51 GATGGGCATTGACAAACGCAAAGCGCAGCAGCACAAGTGGAGAATTTCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28840___ys     51 GATGGGCATTGACAAACGCAAAGCGCAGCAGCACAAGTGGAGAATTTCTG    100

BSNT_04210___    101 AAGACCGGCTGTGGCTGATAGCCATCGTATTTGGAGCGCTCGGTGTCTGG    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU28840___ys    101 AAGACCGGCTGTGGCTGATAGCCATCGTGTTTGGAGCGCTCGGTGTCTGG    150

BSNT_04210___    151 CTTGGCATGCAAACCTTCAGACATAAAACGAAACACGCTTCTTTTAAGTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28840___ys    151 CTTGGCATGCAAACCTTCAGACATAAAACGAAACACGCTTCTTTTAAGTA    200

BSNT_04210___    201 CGGAGTACCGCTTCTTCTGGTAATTGAAGCGATTCTCATCGCTATTTACT    250
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU28840___ys    201 CGGAGTACCGCTTCTTCTGGTAATAGAAGCGATTCTCATCGCTATTTACT    250

BSNT_04210___    251 ACAGCCCGTTTGATTTATAA    270
                     ||||||||||||||||||||
BSU28840___ys    251 ACAGCCCGTTTGATTTATAA    270


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