Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04206 and BSU28820

See Amino acid alignment / Visit BSNT_04206 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:40
# Commandline: needle
#    -asequence dna-align/BSNT_04206___ysdC.1.22522.seq
#    -bsequence dna-align/BSU28820___ysdC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04206___ysdC-BSU28820___ysdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04206___ysdC-BSU28820___ysdC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04206___ysdC
# 2: BSU28820___ysdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1086
# Identity:    1069/1086 (98.4%)
# Similarity:  1069/1086 (98.4%)
# Gaps:           0/1086 ( 0.0%)
# Score: 5277.0
# 
#
#=======================================

BSNT_04206___      1 ATGGCAAAATTAGATGAAACATTGACCATGCTGAAAGATTTAACAGATGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys      1 ATGGCAAAATTAGATGAAACATTGACCATGCTGAAAGATTTAACAGATGC     50

BSNT_04206___     51 AAAAGGCATACCGGGCAATGAAAGAGAAGTAAGGCAAGTGATGAAATCAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys     51 AAAAGGCATACCGGGCAATGAAAGAGAAGTAAGGCAAGTGATGAAATCAT    100

BSNT_04206___    101 ACATAGAACCATTTGCTGATGAGGTGACAACAGATCGCCTGGGCAGTTTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    101 ACATAGAACCATTTGCTGATGAGGTGACAACAGATCGCCTGGGCAGTTTA    150

BSNT_04206___    151 ATTGCCAAAAAAACTGGTGCAGAAAACGGCCCGAAAATTATGATCGCCGG    200
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    151 ATTGCAAAAAAAACTGGTGCAGAAAACGGCCCGAAAATTATGATCGCCGG    200

BSNT_04206___    201 ACATTTGGATGAAGTCGGCTTTATGGTGACACAAATCACAGATAAAGGCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    201 ACATTTGGATGAAGTCGGCTTTATGGTGACACAAATCACAGATAAAGGCT    250

BSNT_04206___    251 TTATCCGTTTTCAAACCGTTGGCGGCTGGTGGGCTCAGGTTATGCTTGCC    300
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28820___ys    251 TTATCCGTTTTCAAACCGTTGGCGGCTGGTGGGCTCAGGTTATGCTTGCT    300

BSNT_04206___    301 CAGCGCGTCACCATCGTCACAAAAAAAGGAGAAATCACTGGGGTTATCGG    350
                     ||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU28820___ys    301 CAGCGCGTCACCATTGTCACAAAAAAAGGAGAAATCACAGGGGTTATCGG    350

BSNT_04206___    351 CTCTAAGCCGCCGCATATTTTATCTCCTGAAGCAAGAAAAAAATCAGTGG    400
                     .|||||||||||.||||||||.||||||||||||||||||||||||||||
BSU28820___ys    351 ATCTAAGCCGCCTCATATTTTGTCTCCTGAAGCAAGAAAAAAATCAGTGG    400

BSNT_04206___    401 AAATAAAAGACATGTTTATTGATATTGGAGCTTCAAGCCGGGAAGAAGCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    401 AAATAAAAGACATGTTTATTGATATTGGAGCTTCAAGCCGGGAAGAAGCC    450

BSNT_04206___    451 TTGGAGTGGGGTATACTCCCGGGAGATATGATCGTTCCGCATTTTGAATT    500
                     ||||||||||||.||||.||||||||||||||||||||||||||||||||
BSU28820___ys    451 TTGGAGTGGGGTGTACTTCCGGGAGATATGATCGTTCCGCATTTTGAATT    500

BSNT_04206___    501 TACGGTCATGAACAATGAAAAATTCCTACTCGCAAAGGCGTGGGACAACC    550
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU28820___ys    501 TACGGTCATGAACAATGAAAAATTCCTACTCGCAAAGGCCTGGGACAACC    550

BSNT_04206___    551 GCATTGGCTGTGCGATTGCAATTGATGTGTTAAGAAACTTACAAAACACA    600
                     ||||.||||||||||||||.||||||||||||||||||||||||||||||
BSU28820___ys    551 GCATCGGCTGTGCGATTGCTATTGATGTGTTAAGAAACTTACAAAACACA    600

BSNT_04206___    601 GATCATCCAAATATAGTGTATGGCGTCGGAACCGTGCAGGAGGAAGTCGG    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    601 GATCATCCAAATATAGTGTATGGCGTCGGAACCGTGCAGGAGGAAGTCGG    650

BSNT_04206___    651 CCTGAGGGGAGCGAAAACGGCTGCACACACCATTCAGCCTGATATTGCGT    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    651 GCTGAGGGGAGCGAAAACGGCTGCACACACCATTCAGCCTGATATTGCGT    700

BSNT_04206___    701 TTGGTGTTGATGTAGGGATAGCAGGAGACACGCCTGGCATTTCCGAGAAA    750
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28820___ys    701 TTGGTGTTGATGTAGGGATAGCAGGAGACACGCCTGGCATTTCCGAGAAG    750

BSNT_04206___    751 GAAGCGCAGAGCAAAATGGGCAAAGGCCCGCAGATTATCGTTTACGATGC    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    751 GAAGCGCAGAGCAAAATGGGCAAAGGCCCGCAGATTATCGTTTACGATGC    800

BSNT_04206___    801 ATCCATGGTCTCTCACAAAGGTTTGCGCGATGCAGTTGTAGCCACTGCGG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    801 ATCCATGGTCTCTCACAAAGGTTTGCGCGATGCAGTTGTAGCCACTGCGG    850

BSNT_04206___    851 AGGAAGCCGGCATTCCGTACCAATTTGATGCCATTGCCGGCGGCGGAACT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    851 AGGAAGCCGGCATTCCGTACCAATTTGATGCCATTGCCGGCGGCGGAACT    900

BSNT_04206___    901 GATTCTGGTGCCATCCATTTGACGGCGAATGGTGTTCCTGCGCTGTCCAT    950
                     |||||.||||||||||||||||||||.|||||.|||||||||||||||||
BSU28820___ys    901 GATTCGGGTGCCATCCATTTGACGGCAAATGGCGTTCCTGCGCTGTCCAT    950

BSNT_04206___    951 TACCATTGCAACCCGCTACATTCATACGCACGCGGCCATGCTGCATCGTG   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys    951 TACCATTGCAACCCGCTACATTCATACGCACGCGGCCATGCTGCATCGTG   1000

BSNT_04206___   1001 ATGATTATGAAAACGCGGTAAAGTTAATTACAGAAGTCATTAAGAAGTTA   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys   1001 ATGATTATGAAAACGCGGTAAAGTTAATTACAGAAGTCATTAAGAAGTTA   1050

BSNT_04206___   1051 GACCGAAAAACGGTTGACGAAATTACGTACCAATAA   1086
                     ||||||||||||||||||||||||||||||||||||
BSU28820___ys   1051 GACCGAAAAACGGTTGACGAAATTACGTACCAATAA   1086


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