Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04206 and BSU28820
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence dna-align/BSNT_04206___ysdC.1.22522.seq
# -bsequence dna-align/BSU28820___ysdC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04206___ysdC-BSU28820___ysdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04206___ysdC-BSU28820___ysdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04206___ysdC
# 2: BSU28820___ysdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1086
# Identity: 1069/1086 (98.4%)
# Similarity: 1069/1086 (98.4%)
# Gaps: 0/1086 ( 0.0%)
# Score: 5277.0
#
#
#=======================================
BSNT_04206___ 1 ATGGCAAAATTAGATGAAACATTGACCATGCTGAAAGATTTAACAGATGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 1 ATGGCAAAATTAGATGAAACATTGACCATGCTGAAAGATTTAACAGATGC 50
BSNT_04206___ 51 AAAAGGCATACCGGGCAATGAAAGAGAAGTAAGGCAAGTGATGAAATCAT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 51 AAAAGGCATACCGGGCAATGAAAGAGAAGTAAGGCAAGTGATGAAATCAT 100
BSNT_04206___ 101 ACATAGAACCATTTGCTGATGAGGTGACAACAGATCGCCTGGGCAGTTTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 101 ACATAGAACCATTTGCTGATGAGGTGACAACAGATCGCCTGGGCAGTTTA 150
BSNT_04206___ 151 ATTGCCAAAAAAACTGGTGCAGAAAACGGCCCGAAAATTATGATCGCCGG 200
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 151 ATTGCAAAAAAAACTGGTGCAGAAAACGGCCCGAAAATTATGATCGCCGG 200
BSNT_04206___ 201 ACATTTGGATGAAGTCGGCTTTATGGTGACACAAATCACAGATAAAGGCT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 201 ACATTTGGATGAAGTCGGCTTTATGGTGACACAAATCACAGATAAAGGCT 250
BSNT_04206___ 251 TTATCCGTTTTCAAACCGTTGGCGGCTGGTGGGCTCAGGTTATGCTTGCC 300
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28820___ys 251 TTATCCGTTTTCAAACCGTTGGCGGCTGGTGGGCTCAGGTTATGCTTGCT 300
BSNT_04206___ 301 CAGCGCGTCACCATCGTCACAAAAAAAGGAGAAATCACTGGGGTTATCGG 350
||||||||||||||.|||||||||||||||||||||||.|||||||||||
BSU28820___ys 301 CAGCGCGTCACCATTGTCACAAAAAAAGGAGAAATCACAGGGGTTATCGG 350
BSNT_04206___ 351 CTCTAAGCCGCCGCATATTTTATCTCCTGAAGCAAGAAAAAAATCAGTGG 400
.|||||||||||.||||||||.||||||||||||||||||||||||||||
BSU28820___ys 351 ATCTAAGCCGCCTCATATTTTGTCTCCTGAAGCAAGAAAAAAATCAGTGG 400
BSNT_04206___ 401 AAATAAAAGACATGTTTATTGATATTGGAGCTTCAAGCCGGGAAGAAGCC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 401 AAATAAAAGACATGTTTATTGATATTGGAGCTTCAAGCCGGGAAGAAGCC 450
BSNT_04206___ 451 TTGGAGTGGGGTATACTCCCGGGAGATATGATCGTTCCGCATTTTGAATT 500
||||||||||||.||||.||||||||||||||||||||||||||||||||
BSU28820___ys 451 TTGGAGTGGGGTGTACTTCCGGGAGATATGATCGTTCCGCATTTTGAATT 500
BSNT_04206___ 501 TACGGTCATGAACAATGAAAAATTCCTACTCGCAAAGGCGTGGGACAACC 550
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU28820___ys 501 TACGGTCATGAACAATGAAAAATTCCTACTCGCAAAGGCCTGGGACAACC 550
BSNT_04206___ 551 GCATTGGCTGTGCGATTGCAATTGATGTGTTAAGAAACTTACAAAACACA 600
||||.||||||||||||||.||||||||||||||||||||||||||||||
BSU28820___ys 551 GCATCGGCTGTGCGATTGCTATTGATGTGTTAAGAAACTTACAAAACACA 600
BSNT_04206___ 601 GATCATCCAAATATAGTGTATGGCGTCGGAACCGTGCAGGAGGAAGTCGG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 601 GATCATCCAAATATAGTGTATGGCGTCGGAACCGTGCAGGAGGAAGTCGG 650
BSNT_04206___ 651 CCTGAGGGGAGCGAAAACGGCTGCACACACCATTCAGCCTGATATTGCGT 700
.|||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 651 GCTGAGGGGAGCGAAAACGGCTGCACACACCATTCAGCCTGATATTGCGT 700
BSNT_04206___ 701 TTGGTGTTGATGTAGGGATAGCAGGAGACACGCCTGGCATTTCCGAGAAA 750
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28820___ys 701 TTGGTGTTGATGTAGGGATAGCAGGAGACACGCCTGGCATTTCCGAGAAG 750
BSNT_04206___ 751 GAAGCGCAGAGCAAAATGGGCAAAGGCCCGCAGATTATCGTTTACGATGC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 751 GAAGCGCAGAGCAAAATGGGCAAAGGCCCGCAGATTATCGTTTACGATGC 800
BSNT_04206___ 801 ATCCATGGTCTCTCACAAAGGTTTGCGCGATGCAGTTGTAGCCACTGCGG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 801 ATCCATGGTCTCTCACAAAGGTTTGCGCGATGCAGTTGTAGCCACTGCGG 850
BSNT_04206___ 851 AGGAAGCCGGCATTCCGTACCAATTTGATGCCATTGCCGGCGGCGGAACT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 851 AGGAAGCCGGCATTCCGTACCAATTTGATGCCATTGCCGGCGGCGGAACT 900
BSNT_04206___ 901 GATTCTGGTGCCATCCATTTGACGGCGAATGGTGTTCCTGCGCTGTCCAT 950
|||||.||||||||||||||||||||.|||||.|||||||||||||||||
BSU28820___ys 901 GATTCGGGTGCCATCCATTTGACGGCAAATGGCGTTCCTGCGCTGTCCAT 950
BSNT_04206___ 951 TACCATTGCAACCCGCTACATTCATACGCACGCGGCCATGCTGCATCGTG 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 951 TACCATTGCAACCCGCTACATTCATACGCACGCGGCCATGCTGCATCGTG 1000
BSNT_04206___ 1001 ATGATTATGAAAACGCGGTAAAGTTAATTACAGAAGTCATTAAGAAGTTA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28820___ys 1001 ATGATTATGAAAACGCGGTAAAGTTAATTACAGAAGTCATTAAGAAGTTA 1050
BSNT_04206___ 1051 GACCGAAAAACGGTTGACGAAATTACGTACCAATAA 1086
||||||||||||||||||||||||||||||||||||
BSU28820___ys 1051 GACCGAAAAACGGTTGACGAAATTACGTACCAATAA 1086
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