Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04197 and BSU28750
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:38
# Commandline: needle
# -asequence dna-align/BSNT_04197___araN.1.22522.seq
# -bsequence dna-align/BSU28750___araN.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04197___araN-BSU28750___araN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04197___araN-BSU28750___araN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04197___araN
# 2: BSU28750___araN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1302
# Identity: 1260/1302 (96.8%)
# Similarity: 1260/1302 (96.8%)
# Gaps: 0/1302 ( 0.0%)
# Score: 6132.0
#
#
#=======================================
BSNT_04197___ 1 ATGAAAAAAATGACTGTCTGTTTTCTTGCGCTCATGATGCTGCTTACATT 50
||||||||||||||||||||||||||||.||||||||||.||||.|||||
BSU28750___ar 1 ATGAAAAAAATGACTGTCTGTTTTCTTGTGCTCATGATGTTGCTGACATT 50
BSNT_04197___ 51 AGTCATTGCCGGGTGTTCAGCAGAAAAATCATCCGGCAAATCGGGTGAAA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 51 AGTCATTGCCGGGTGTTCAGCAGAAAAATCATCCGGCAAATCGGGTGAAA 100
BSNT_04197___ 101 CTGAGCTGACCTTTTGGACATTTAACGGGCTTCATGAGCAGTTCTATGTA 150
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28750___ar 101 CTGAGCTGACCTTTTGGACATTTAACGGGCTTCATGAGCAGTTCTATGTG 150
BSNT_04197___ 151 GAAATGGTGAAGGAATGGAATAAAAAATATCCTGACCGCAAAATTAAGCT 200
||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU28750___ar 151 GAAATGGTGAAGGAATGGAACAAAAAATATCCTGACCGCAAAATTAAGCT 200
BSNT_04197___ 201 GAATACGGTCGTTTATCCGTATGGACAAATGCACGATAACTTGTCGATCT 250
||||||||||||||||||.|||||||||||||||||||||||.||.||||
BSU28750___ar 201 GAATACGGTCGTTTATCCATATGGACAAATGCACGATAACTTATCTATCT 250
BSNT_04197___ 251 CCTTAATAGCGGGAGAAGGCGTCCCTGATATTGCCGATGTCGAATTGGCC 300
||.|||||||||||||||||||.|||||||||||.|||||||||||||||
BSU28750___ar 251 CCCTAATAGCGGGAGAAGGCGTTCCTGATATTGCAGATGTCGAATTGGCC 300
BSNT_04197___ 301 CGTTTTTCAAACTTTTTGAAGGTCTCTGACATACCGCTTGCCGATTTGAC 350
||||||||||||||||||||||.|||||||||||||||||||||.|||||
BSU28750___ar 301 CGTTTTTCAAACTTTTTGAAGGGCTCTGACATACCGCTTGCCGACTTGAC 350
BSNT_04197___ 351 TCCGCTGATTGAAAAGGACCGCGATAAATTCGTTGAGGCGCGGCTGACCC 400
||||||||||||||||||.|||||||||||||||||||||||||||||..
BSU28750___ar 351 TCCGCTGATTGAAAAGGATCGCGATAAATTCGTTGAGGCGCGGCTGACAT 400
BSNT_04197___ 401 TGTACAGCAAAAACGGCAAGCTTTACGGACTCGATACGCATGTAGGAACA 450
||||||||||||||||.||||||||||||||||||||.||||||||.|||
BSU28750___ar 401 TGTACAGCAAAAACGGAAAGCTTTACGGACTCGATACACATGTAGGGACA 450
BSNT_04197___ 451 ACAGTCATGTTTTATAACATGGATGTGATGAAGAAAGCCGGCGTCAATCC 500
||.|||||||||||||||||||||||||||||.|||||||||||||||||
BSU28750___ar 451 ACGGTCATGTTTTATAACATGGATGTGATGAAAAAAGCCGGCGTCAATCC 500
BSNT_04197___ 501 TGACGATATTAAAACATGGGATGATTACCATAAAGCCGGACAGAAAGTGC 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 501 TGACGATATTAAAACATGGGATGATTACCATAAAGCCGGACAGAAAGTGC 550
BSNT_04197___ 551 GCAAAGTGACCGGGAAGCCGATGGGAACGGTAGAAACAAATGATTCCGGA 600
|||||||||||||||||||||||||||||||.||||||||||||||||.|
BSU28750___ar 551 GCAAAGTGACCGGGAAGCCGATGGGAACGGTGGAAACAAATGATTCCGCA 600
BSNT_04197___ 601 ACGTTCTTATCTATGATTTCACAGCAAAACTCAGGTTATTTTGATAAAAA 650
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU28750___ar 601 ACGTTCTTATCTATGATTTCACAGCAAAACTCAGGCTATTTTGATAAAAA 650
BSNT_04197___ 651 CGGCAAGCTGATCCTCAATAATGACACCAACGTCAAAACACTTCAATATT 700
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU28750___ar 651 CGGCAAGCTGATCCTCAATAATGACACCAACGTAAAAACACTTCAATATT 700
BSNT_04197___ 701 TAAAAGACATGATCAATGATAAAACGATGATTCCTGCGCCGGGCGGCGGG 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 701 TAAAAGACATGATCAATGATAAAACGATGATTCCTGCGCCGGGCGGCGGG 750
BSNT_04197___ 751 CATCACAGTGAAGAATACTACGGCTTTATGAACCAAGGAGGAGCTGCTTC 800
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 751 CATCACAGTGAAGAATACTACGGCTTTATGAACCAAGGAGGAGCTGCTTC 800
BSNT_04197___ 801 AGTCCTCATGCCGATTTGGTATATGGGAAGATTTATCGACTATATGCCTG 850
|||.|||||||||||||||||||||||||||||||||||.||||||||||
BSU28750___ar 801 AGTTCTCATGCCGATTTGGTATATGGGAAGATTTATCGATTATATGCCTG 850
BSNT_04197___ 851 ATCTGAAAGGGAAAATTGCCATCAGGCCGCTCCCGGCATGGAAAGAGGGA 900
|||||||||||||.|||||||||||.|||||||||||||||||||||||.
BSU28750___ar 851 ATCTGAAAGGGAAGATTGCCATCAGACCGCTCCCGGCATGGAAAGAGGGG 900
BSNT_04197___ 901 GGCGACCGCTCGGCAGGTTTGGGCGGTACGGCAACTGTTGTGCCGAAACA 950
|||||||||||||||||||||||||||||||||||||||||.|||||.||
BSU28750___ar 901 GGCGACCGCTCGGCAGGTTTGGGCGGTACGGCAACTGTTGTACCGAAGCA 950
BSNT_04197___ 951 AGCCAAGCATGTTGAGTTAGCAAAAGAGTTTTTAGCCTTTGCGAAGGGCT 1000
|.|||||||||||||||||||||||||||||||.||||||||||||||||
BSU28750___ar 951 ATCCAAGCATGTTGAGTTAGCAAAAGAGTTTTTGGCCTTTGCGAAGGGCT 1000
BSNT_04197___ 1001 CTAAAGAAGGAAACAAAAAGCTCTGGAGCGTACTAGGGTTTGACCCGCTT 1050
||.||||||||||.|||||.||||||||||||||.||.||||||||||||
BSU28750___ar 1001 CTGAAGAAGGAAATAAAAAACTCTGGAGCGTACTCGGCTTTGACCCGCTT 1050
BSNT_04197___ 1051 CGCTGGGATGTCTGGAGCTCCAAGGAATTGAAAGAGAAAAACAAGTACAC 1100
|||||||||||.||||||||||||||||||||||||||||||||.|||||
BSU28750___ar 1051 CGCTGGGATGTTTGGAGCTCCAAGGAATTGAAAGAGAAAAACAAATACAC 1100
BSNT_04197___ 1101 GGATTACTTCCAAAACGGAACAGGCATTTTTTCCGTGCTGCTCGATATCA 1150
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU28750___ar 1101 GGATTACTTCCAAAACGGAACAGGCATTTTTTCTGTGCTGCTCGATATCA 1150
BSNT_04197___ 1151 AGGATGAAATCAATCCAATTTATTTACATGAGGATTTTGCCAAGGCTTCA 1200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 1151 AGGATGAAATCAATCCAATTTATTTACATGAGGATTTTGCCAAGGCTTCA 1200
BSNT_04197___ 1201 GACCTTGTCAACAGAAGCGTATTGTTCGACGCGCTTAAATCTCAGCAAAA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 1201 GACCTTGTCAACAGAAGCGTATTGTTCGACGCGCTTAAATCTCAGCAAAA 1250
BSNT_04197___ 1251 AACGCCTAAACAAGCCTTGGACAGAGCGGCAGGTGAACTGAAACAGAAAT 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28750___ar 1251 AACGCCTAAACAAGCCTTGGACAGAGCGGCAGGTGAACTGAAACAGAAAT 1300
BSNT_04197___ 1301 AG 1302
||
BSU28750___ar 1301 AG 1302
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