Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04195 and BSU28730

See Amino acid alignment / Visit BSNT_04195 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:38
# Commandline: needle
#    -asequence dna-align/BSNT_04195___araQ.1.22522.seq
#    -bsequence dna-align/BSU28730___araQ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04195___araQ-BSU28730___araQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04195___araQ-BSU28730___araQ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04195___araQ
# 2: BSU28730___araQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 846
# Identity:     813/846 (96.1%)
# Similarity:   813/846 (96.1%)
# Gaps:           0/846 ( 0.0%)
# Score: 3933.0
# 
#
#=======================================

BSNT_04195___      1 ATGTTGCGGCACAGTCCTCAGTTCAGCGTTTACAGAATTGCGCTAACCCT     50
                     |||||||||||||||||||||||.||||||||.|||||||||||.|||||
BSU28730___ar      1 ATGTTGCGGCACAGTCCTCAGTTTAGCGTTTATAGAATTGCGCTGACCCT     50

BSNT_04195___     51 GTTTTTTATTATGCTGAGCCTATTGTATCTTTTTCCGATTTTCTGTTTGC    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU28730___ar     51 GTTTTTTATGATGCTGAGCCTATTGTATCTTTTTCCGATTTTCTGTTTGC    100

BSNT_04195___    101 TTTTAGGATCATTAAAGCCCTCATCTGAGCTTTTGCGTGTGGGGCTCAAT    150
                     |||||||||||||||||||.||||||||||||||||||||||||||.|||
BSU28730___ar    101 TTTTAGGATCATTAAAGCCGTCATCTGAGCTTTTGCGTGTGGGGCTGAAT    150

BSNT_04195___    151 CTCGACATTGATCCTAAAGTAATGAGTCTTGATAATTATACATTTCTGTT    200
                     ||.||.||||||||.|||||.||||||.|||||||.||.|||||||||||
BSU28730___ar    151 CTTGATATTGATCCAAAAGTGATGAGTTTTGATAACTACACATTTCTGTT    200

BSNT_04195___    201 TAACGGCGGAAGCATTTATTTCAAATGGTTTTTTAACAGTCTTGTACTTG    250
                     |||.|||||.||||||||||||||||||||||||||||||||||||||.|
BSU28730___ar    201 TAATGGCGGCAGCATTTATTTCAAATGGTTTTTTAACAGTCTTGTACTCG    250

BSNT_04195___    251 GGCTTTTCACAACCATGCTCACCCTGTTTTTTTCTTCGATGATCGGGTAC    300
                     |.|||||.||.||..|||||||.|||||||||||||||||||||||||||
BSU28730___ar    251 GACTTTTTACGACTGTGCTCACTCTGTTTTTTTCTTCGATGATCGGGTAC    300

BSNT_04195___    301 GGGCTTGCGGTTTATGATTTTAAGGGCAGAAATATCATCTTTGTTCTTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    301 GGGCTTGCGGTTTATGATTTTAAGGGCAGAAATATCATCTTTGTTCTTGT    350

BSNT_04195___    351 GCTGATTATCATGATGGTTCCGCTGGAAGTGATGATGCTTCCTCTGTTTA    400
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    351 GCTGATTATTATGATGGTTCCGCTGGAAGTGATGATGCTTCCTCTGTTTA    400

BSNT_04195___    401 AGCTTACCGTCGGACTGCACTTGATCGATTCATATACAGGTGTCATATTG    450
                     |.|||||.|||||||||||||||||||||||||||||.||||||||||||
BSU28730___ar    401 AACTTACTGTCGGACTGCACTTGATCGATTCATATACGGGTGTCATATTG    450

BSNT_04195___    451 CCGTTTATCGTTTCACCTGTTGCCGTTTTCTTTTTTAGGCAATATGCTCT    500
                     |||||||||||||||||||||||.|||||||||||.||||||||||||||
BSU28730___ar    451 CCGTTTATCGTTTCACCTGTTGCTGTTTTCTTTTTCAGGCAATATGCTCT    500

BSNT_04195___    501 TGGCCTTCCAAGAGATCTGCTGGACTCTGCAAGGATGGACGGCTGTACGG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    501 TGGCCTTCCAAGAGATCTGCTGGACTCTGCAAGGATGGACGGCTGTACGG    550

BSNT_04195___    551 AATTCGGCATCTTTTTCAGGATTATGGCACCGCTGATGAAACCGGCTTTC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    551 AATTCGGCATCTTTTTCAGGATTATGGCACCGCTGATGAAACCGGCTTTC    600

BSNT_04195___    601 GGTGCCATGATTATCCTTCAGTCCTTAAACAGCTGGAACAACTTCTTGTG    650
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    601 GGTGCGATGATTATCCTTCAGTCCTTAAACAGCTGGAACAACTTCTTGTG    650

BSNT_04195___    651 GCCGCTGATTGTGCTTCGGTCGAAAGAAATGTTTACGCTTCCAATAGGGC    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    651 GCCGCTGATTGTGCTTCGGTCGAAAGAAATGTTTACGCTTCCAATAGGGC    700

BSNT_04195___    701 TGTCCAGCTTGCTGAGCCCTTATGGCAACAACTATGACATGCTTATATCC    750
                     |||||||||||||||||||||||||.||.||.||.|||||||||||||||
BSU28730___ar    701 TGTCCAGCTTGCTGAGCCCTTATGGAAATAATTACGACATGCTTATATCC    750

BSNT_04195___    751 GGCTCAGTATTTGCGATTTTGCCGGTGATTATCATTTTCTTGTTTTTCCA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    751 GGCTCAGTATTTGCGATTTTGCCGGTGATTATCATTTTCTTGTTTTTCCA    800

BSNT_04195___    801 AAAGTACTTTATCTCCGGCCTGACGGTAGGGGGAGTCAAAGGTTAA    846
                     ||||||||||||||||||||||||||||||||||||||||||||||
BSU28730___ar    801 AAAGTACTTTATCTCCGGCCTGACGGTAGGGGGAGTCAAAGGTTAA    846


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.