Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04191 and BSU28700

See Amino acid alignment / Visit BSNT_04191 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:37
# Commandline: needle
#    -asequence dna-align/BSNT_04191___ysfE.1.22522.seq
#    -bsequence dna-align/BSU28700___ysfE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04191___ysfE-BSU28700___ysfE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04191___ysfE-BSU28700___ysfE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04191___ysfE
# 2: BSU28700___ysfE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 243
# Identity:     242/243 (99.6%)
# Similarity:   242/243 (99.6%)
# Gaps:           0/243 ( 0.0%)
# Score: 1206.0
# 
#
#=======================================

BSNT_04191___      1 TTGGCGCTTAATACGCGGGAAAGCGCCAGAGACATCACGGCGCTGGACAT     50
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU28700___ys      1 TTGGCGCTTAATACCCGGGAAAGCGCCAGAGACATCACGGCGCTGGACAT     50

BSNT_04191___     51 TCCGGATACATCTGCTTCAAACACATTTGAAATCGGGTTTGTTACTGAAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28700___ys     51 TCCGGATACATCTGCTTCAAACACATTTGAAATCGGGTTTGTTACTGAAA    100

BSNT_04191___    101 ATGTAGAAGCGGTCATCAAAAGGATGAGAGAACAAGGCGTATCGATTATC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28700___ys    101 ATGTAGAAGCGGTCATCAAAAGGATGAGAGAACAAGGCGTATCGATTATC    150

BSNT_04191___    151 GGGGAGCCGAAAGTGAAACCATGGGGGCAGACGGTCGCCTATATCGCTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28700___ys    151 GGGGAGCCGAAAGTGAAACCATGGGGGCAGACGGTCGCCTATATCGCTGA    200

BSNT_04191___    201 TCCGGATGGACATTATATCGAAATTTGCAGTCCGATGGAATAA    243
                     |||||||||||||||||||||||||||||||||||||||||||
BSU28700___ys    201 TCCGGATGGACATTATATCGAAATTTGCAGTCCGATGGAATAA    243


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