Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04188 and BSU28680
See
Amino acid alignment /
Visit
BSNT_04188 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:37
# Commandline: needle
# -asequence dna-align/BSNT_04188___ysfC.1.22522.seq
# -bsequence dna-align/BSU28680___glcD.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04188___ysfC-BSU28680___glcD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04188___ysfC-BSU28680___glcD.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04188___ysfC
# 2: BSU28680___glcD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1413
# Identity: 1363/1413 (96.5%)
# Similarity: 1363/1413 (96.5%)
# Gaps: 0/1413 ( 0.0%)
# Score: 6615.0
#
#
#=======================================
BSNT_04188___ 1 ATGATCACCAAGGATGTAAAGGAGCAGCTGATTCGGGTCTCCGGACCAGA 50
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU28680___gl 1 ATGATCACCAAGGATGTAAAGGAGCAGCTGATTCAGGTCTCCGGACCAGA 50
BSNT_04188___ 51 AAACTTTGATGACTCGAATGCCGGCCGTCTCGTCTATTCATATGATGCGA 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 51 AAACTTTGATGACTCGAATGCCGGCCGTCTCGTCTATTCATATGATGCGA 100
BSNT_04188___ 101 CGCCTCAGTATCAGTCTATGCCTGATGCCGTGATTGCTCCGAGGAATACT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 101 CGCCTCAGTATCAGTCTATGCCTGATGCCGTGATTGCTCCGAGGAATACT 150
BSNT_04188___ 151 GAAGAAGTATCACGCATTTTAACAATTTGCAGCGAACATCGAGTGCCGAT 200
||.|||.|||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 151 GATGAAATATCACGCATTTTAACAATTTGCAGCGAACATCGAGTGCCGAT 200
BSNT_04188___ 201 CGTTCCAAGAGGATCAGGGACAAACCTGTGCGGCGGCACGTGCCCGACTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 201 CGTTCCAAGAGGATCAGGGACAAACCTGTGCGGCGGCACGTGCCCGACTG 250
BSNT_04188___ 251 AAGGCGGACTTGTGCTTCTCTTTAAGCACATGAACCAGATTCTTGAGATT 300
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU28680___gl 251 AAGGCGGACTTGTGCTTCTCTTTAAGCACATGAACCAGATTCTTGAAATT 300
BSNT_04188___ 301 GATGAAGAAAATTTAACTGCCACAGTTCAGCCGGGCGTCATTACGTTGGA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 301 GATGAAGAAAATTTAACTGCCACAGTTCAGCCGGGCGTCATTACGTTGGA 350
BSNT_04188___ 351 TATGATCCGGGCAGTTGAAAGCAAAGGTTTATTTTATCCGCCTGACCCGA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 351 TATGATCCGGGCAGTTGAAAGCAAAGGTTTATTTTATCCGCCTGACCCGA 400
BSNT_04188___ 401 GTTCTATGAAAATATCAACTATCGGGGGCAACATCAATGAAAATTCCGGC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 401 GTTCTATGAAAATATCAACTATCGGGGGCAACATCAATGAAAATTCCGGC 450
BSNT_04188___ 451 GGGCTCCGCGGATTAAAATACGGCGTCACCCGCGACTATGTTATTGGACT 500
|||||.|||||||||||||||||.||||||||||||||||||||||||||
BSU28680___gl 451 GGGCTACGCGGATTAAAATACGGTGTCACCCGCGACTATGTTATTGGACT 500
BSNT_04188___ 501 GGAGGTTGTGCTCGCAAATGGTGACATCATCCGCACCGGCGGAAAACTCG 550
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 501 GGAGGTTGTTCTCGCAAATGGTGACATCATCCGCACCGGCGGAAAACTCG 550
BSNT_04188___ 551 CAAAGGATGTGGCCGGATACGACCTCACACGTCTTTTTGTCGGCTCAGAA 600
||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU28680___gl 551 CAAAGGATGTGGCCGGATACGATCTCACACGTCTTTTTGTCGGCTCAGAA 600
BSNT_04188___ 601 GGAACACTCGGCATTGTGACAGAGGCAATCGTCAAGCTCGTTCCAAAGCC 650
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU28680___gl 601 GGAACACTCGGCATTGTGACAGAGGCAATCGTCAAACTCGTTCCAAAGCC 650
BSNT_04188___ 651 TGAAACAAAAAAGACGCTGCTTGCCCTATATGAAAACATCGATGCCGCTG 700
.||||||||.|||||||||||||||||.||||||||||||||||||||||
BSU28680___gl 651 GGAAACAAAGAAGACGCTGCTTGCCCTTTATGAAAACATCGATGCCGCTG 700
BSNT_04188___ 701 CTCAAACGGTATCAGACATCATTGCCGCAAAAATCATACCCGCCACGCTT 750
|||||||||||||.|||||.||||||||||||||.||||||||.||||||
BSU28680___gl 701 CTCAAACGGTATCGGACATTATTGCCGCAAAAATTATACCCGCTACGCTT 750
BSNT_04188___ 751 GAATTTCTCGACCAGCCTACACTTTTGGTGATTGAGGATTATGCCAAAAT 800
|||||||||||.|||||||||||.||||||||||||||||||||||||||
BSU28680___gl 751 GAATTTCTCGATCAGCCTACACTATTGGTGATTGAGGATTATGCCAAAAT 800
BSNT_04188___ 801 CGGACTGCCAACAAACGCAAAGGCGGTTCTATTAATTGAGCAAGACGGAC 850
||||||.||.||||.||||||.||.|||||.||||||||.||||||||.|
BSU28680___gl 801 CGGACTTCCGACAAGCGCAAAAGCAGTTCTGTTAATTGAACAAGACGGGC 850
BSNT_04188___ 851 CGCTTGAAATCGTGGCACGGGATATGGAAAAGATTGAGGCCATTTGCAAA 900
|..||||||..||.|.||||||||||||||||||||||||.||.||||||
BSU28680___gl 851 CATTTGAAACTGTTGAACGGGATATGGAAAAGATTGAGGCGATCTGCAAA 900
BSNT_04188___ 901 AAAGGCGACGCCGTTTCCGTTCAGACCGCACAAACAGAGGAGGAGGCATT 950
||||||||||||||.|||||||||||||||||||||||||||||.||.||
BSU28680___gl 901 AAAGGCGACGCCGTATCCGTTCAGACCGCACAAACAGAGGAGGAAGCGTT 950
BSNT_04188___ 951 CGCCCTGACTGAAGCACGGCGCTCTGCACTTTCTGCCCTAGCCCGCCTCA 1000
.||||||||||||||.|||||.||||||||||||||||||||||||||||
BSU28680___gl 951 TGCCCTGACTGAAGCCCGGCGTTCTGCACTTTCTGCCCTAGCCCGCCTCA 1000
BSNT_04188___ 1001 AGCCGACGACGATTTTAGAGGATGCGACCGTTCCTCGCTCAGAAATCGCC 1050
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 1001 AACCGACGACGATTTTAGAGGATGCGACCGTTCCTCGCTCAGAAATCGCC 1050
BSNT_04188___ 1051 AATATGGTTAAAGCGATTAATGATATTGCTGCTAAATATGATATTTCCAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 1051 AATATGGTTAAAGCGATTAATGATATTGCTGCTAAATATGATATTTCCAT 1100
BSNT_04188___ 1101 CTGCACCTTTGGCCATGCGGGAGACGGGAACCTTCACCCGACATGCACGA 1150
||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU28680___gl 1101 CTGCACCTTTGGTCATGCGGGAGACGGGAACCTTCACCCGACATGCACGA 1150
BSNT_04188___ 1151 CAGACATAAGAAATGAGGATGAAATGGAGCGTGTCGAACAGGCCTTTGCC 1200
||||||||||||||.|||||||||||||.||||||||||||||.||||||
BSU28680___gl 1151 CAGACATAAGAAATAAGGATGAAATGGAACGTGTCGAACAGGCTTTTGCC 1200
BSNT_04188___ 1201 GAGATTTTTGAGAAAGCGATTGAACTTGGCGGGACGATAACCGGAGAGCA 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 1201 GAGATTTTTGAGAAAGCGATTGAACTTGGCGGGACGATAACCGGAGAGCA 1250
BSNT_04188___ 1251 CGGAGTCGGGGCAATGAAAGCGCCTTACTTGGAGATGAAGTTGAAAAAAG 1300
|||||||||||.|||||||||||||||||||||.||||||.|||||||||
BSU28680___gl 1251 CGGAGTCGGGGAAATGAAAGCGCCTTACTTGGAAATGAAGCTGAAAAAAG 1300
BSNT_04188___ 1301 AAGGCATTGATGCGATGAAAGCGTTGAAAGCGGCATTTGACCCCCGGAAC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28680___gl 1301 AAGGCATTGATGCGATGAAAGCGTTGAAAGCGGCATTTGACCCCCGGAAC 1350
BSNT_04188___ 1351 ATATTAAATCCGGGCAAAGTGTTTGCGAAAGATGCCAGAAAACGTGTGGT 1400
|||||||||||.||||||.|||||||||||||||||||||||||||||||
BSU28680___gl 1351 ATATTAAATCCCGGCAAAATGTTTGCGAAAGATGCCAGAAAACGTGTGGT 1400
BSNT_04188___ 1401 GGCGGAAAGATGA 1413
|||||||||||||
BSU28680___gl 1401 GGCGGAAAGATGA 1413
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.