Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04180 and BSU28640

See Amino acid alignment / Visit BSNT_04180 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:36
# Commandline: needle
#    -asequence dna-align/BSNT_04180___pheS.1.22522.seq
#    -bsequence dna-align/BSU28640___pheS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04180___pheS-BSU28640___pheS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04180___pheS-BSU28640___pheS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04180___pheS
# 2: BSU28640___pheS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1035
# Identity:    1027/1035 (99.2%)
# Similarity:  1027/1035 (99.2%)
# Gaps:           0/1035 ( 0.0%)
# Score: 5103.0
# 
#
#=======================================

BSNT_04180___      1 ATGGAAGAAAAGCTAAAACAGCTGGAACAAGAAGCTTTAGAACAAGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph      1 ATGGAAGAAAAGCTAAAACAGCTGGAACAAGAAGCTTTAGAACAAGTAGA     50

BSNT_04180___     51 AGCGGCAAGCTCATTGAAGGTTGTCAATGATATTCGGGTGCAATATCTCG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph     51 AGCGGCAAGCTCATTGAAGGTTGTCAATGATATTCGGGTGCAATATCTCG    100

BSNT_04180___    101 GAAAAAAAGGGCCGATTACAGAAGTGCTGCGCGGAATGGGCAAGCTTTCT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    101 GAAAAAAAGGGCCGATTACAGAAGTGCTGCGCGGAATGGGCAAGCTTTCT    150

BSNT_04180___    151 GCTGAGGAACGTCCAAAAATGGGGGCCCTCGCGAACGAAGTAAGGGAGCG    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28640___ph    151 GCTGAGGAACGTCCAAAAATGGGGGCGCTCGCGAACGAAGTAAGGGAGCG    200

BSNT_04180___    201 TATTGCCAATGCGATTGCTGACAAAAACGAGAAGCTTGAAGAAGAGGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    201 TATTGCCAATGCGATTGCTGACAAAAACGAGAAGCTTGAAGAAGAGGAAA    250

BSNT_04180___    251 TGAAACAGAAGCTTGCAGGACAGACAATTGACGTCACGCTGCCGGGGAAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    251 TGAAACAGAAGCTTGCAGGACAGACAATTGACGTCACGCTGCCGGGGAAC    300

BSNT_04180___    301 CCTGTTGCAGTCGGCGGCCGCCATCCGCTCACTGTTGTCATTGAAGAAAT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    301 CCTGTTGCAGTCGGCGGCCGCCATCCGCTCACTGTTGTCATTGAAGAAAT    350

BSNT_04180___    351 TGAAGATTTATTTATCGGTATGGGCTACACAGTCGAGGAAGGGCCAGAGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    351 TGAAGATTTATTTATCGGTATGGGCTACACAGTCGAGGAAGGGCCAGAGG    400

BSNT_04180___    401 TTGAAACGGATTACTACAACTTCGAATCGCTCAATCTTCCGAAAGAACAC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    401 TTGAAACGGATTACTACAACTTCGAATCGCTCAATCTTCCGAAAGAACAC    450

BSNT_04180___    451 CCTGCGCGCGATATGCAGGACAGCTTTTACATCACAGAGGAAACTTTGAT    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    451 CCAGCGCGCGATATGCAGGACAGCTTTTACATCACAGAGGAAACTTTGAT    500

BSNT_04180___    501 GAGAACGCAAACTTCTCCTGTCCAAACACGGACGATGGAAAAGCATAAAG    550
                     ||||||||||||||||||||||||||||||.|||||||||||||||.|||
BSU28640___ph    501 GAGAACGCAAACTTCTCCTGTCCAAACACGTACGATGGAAAAGCATGAAG    550

BSNT_04180___    551 GCAAAGGTCCCGTTAAAATCATTTGCCCGGGTAAAGTATATCGCCGTGAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    551 GCAAAGGTCCCGTTAAAATCATTTGCCCGGGTAAAGTATATCGCCGTGAT    600

BSNT_04180___    601 AACGATGATGCGACGCACTCTCACCAATTTATGCAAATTGAAGGGCTTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    601 AACGATGATGCGACGCACTCTCACCAATTTATGCAAATTGAAGGGCTTGT    650

BSNT_04180___    651 CGTTGACAAAAACATCAGCATGAGTGATTTAAAAGGAACGCTTGAACTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU28640___ph    651 CGTTGACAAAAACATCAGCATGAGTGATTTAAAAGGAACGCTTGAACTTG    700

BSNT_04180___    701 TTGCGAAAAAAATGTTCGGGCAAGACCGTGAAATCAGACTCCGCCCAAGC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    701 TTGCGAAAAAAATGTTCGGGCAAGACCGTGAAATCAGACTCCGCCCAAGC    750

BSNT_04180___    751 TTCTTCCCGTTTACTGAGCCTTCAGTAGAAGTGGATGTGACATGCTTTAA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    751 TTCTTCCCGTTTACTGAGCCTTCAGTAGAAGTGGATGTGACATGCTTTAA    800

BSNT_04180___    801 ATGTGGTGGAAACGGCTGCTCAGTATGTAAAGGAACAGGCTGGATTGAAA    850
                     |||.|||||.||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    801 ATGCGGTGGGAACGGCTGCTCAGTATGTAAAGGAACAGGCTGGATTGAAA    850

BSNT_04180___    851 TCCTCGGTGCCGGAATGGTTCACCCGAACGTGCTTAAAATGGCTGGCTTT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    851 TCCTCGGTGCCGGAATGGTTCACCCGAACGTGCTTAAAATGGCTGGCTTT    900

BSNT_04180___    901 GATCCGAAGGAATATCAGGGCTTCGCATTCGGAATGGGTGTTGAGCGCAT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28640___ph    901 GATCCGAAGGAATATCAGGGCTTCGCATTCGGAATGGGTGTTGAGCGCAT    950

BSNT_04180___    951 CGCGATGCTGAAATACGGCATTGATGATATCCGCCACTTCTATACAAACG   1000
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU28640___ph    951 CGCGATGCTGAAATATGGCATTGATGATATCCGCCACTTCTATACAAACG   1000

BSNT_04180___   1001 ATGTCAGATTTATTTCGCAGTTTAAACAGGCGTAA   1035
                     |||||||||||||||||||||||||||||||||||
BSU28640___ph   1001 ATGTCAGATTTATTTCGCAGTTTAAACAGGCGTAA   1035


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04180 and BSU28640

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
