Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04175 and BSU28620
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:35
# Commandline: needle
# -asequence dna-align/BSNT_04175___rnhC.1.22522.seq
# -bsequence dna-align/BSU28620___rnhC.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04175___rnhC-BSU28620___rnhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04175___rnhC-BSU28620___rnhC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04175___rnhC
# 2: BSU28620___rnhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity: 922/942 (97.9%)
# Similarity: 922/942 (97.9%)
# Gaps: 3/942 ( 0.3%)
# Score: 4531.0
#
#
#=======================================
BSNT_04175___ 1 GTGTCCCATTCAGTGATAAAAGTATCGTTGTCTGCTATTGACCAAATGAA 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 1 GTGTCCCATTCAGTGATAAAAGTATCGTTGTCTGCTATTGACCAAATGAA 50
BSNT_04175___ 51 AATGACATACAGCGGTTCGCTTACAGCCTCTGTTCCGCAGGGAGCCGTTT 100
||||||.|||||||||||.|||||||||||||||||||||||||||||||
BSU28620___rn 51 AATGACGTACAGCGGTTCACTTACAGCCTCTGTTCCGCAGGGAGCCGTTT 100
BSNT_04175___ 101 TTCAGGCGAAACCGCCCGGCTGTACCATTACAGCATATAAATCAGGCAAG 150
|||||||.||||||||||||||||||||||||||||||.|||||||.|||
BSU28620___rn 101 TTCAGGCAAAACCGCCCGGCTGTACCATTACAGCATATCAATCAGGTAAG 150
BSNT_04175___ 151 GTCTTGTTTCAAGGCAAAAACGCAGCGGCAGAATCCGCGCGCTGGGGAAC 200
||||||||||||||.||||||||.||||||||||||||||||||||||||
BSU28620___rn 151 GTCTTGTTTCAAGGAAAAAACGCTGCGGCAGAATCCGCGCGCTGGGGAAC 200
BSNT_04175___ 201 AGCAGAGCC---GGAAAAGAAGAAAATGGCCAAAAAGCCGGCTGATCCCC 247
||||||||| ||||||||||||||.|||||||||||||||||||||||
BSU28620___rn 201 AGCAGAGCCTCAGGAAAAGAAGAAAACGGCCAAAAAGCCGGCTGATCCCC 250
BSNT_04175___ 248 GCTATGCCCCTCCGGCAGATATCGCCGGAATGTCTGTTATCGGTTCTGAC 297
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 251 GCTATGCCCCTCCGGCAGATATCGCCGGAATGTCTGTTATCGGTTCTGAC 300
BSNT_04175___ 298 GAAGTCGGAACCGGAGATTACTTTGGCCCAATGACGGTTGTATGCGCGTA 347
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 301 GAAGTCGGAACCGGAGATTACTTTGGCCCAATGACGGTTGTATGCGCGTA 350
BSNT_04175___ 348 CGTCGACAAAACCATGCTTCCTTTAATGAAGGAACTCGGTGTTAAGGATT 397
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 351 CGTCGACAAAACCATGCTTCCTTTAATGAAGGAACTCGGTGTTAAGGATT 400
BSNT_04175___ 398 CTAAAGATTTAAAAGATCCGCAAATCATCGAGATTGCCCGAAACCTGATC 447
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28620___rn 401 CTAAAGATTTAAAAGATCCGCAAATCATCGAGATTGCCCGAAACCTGATT 450
BSNT_04175___ 448 AAAACCATTCCATATAGCCTGCTGGTTTTAAAAAATGAAAAGTATAACAG 497
|||||||||||.||.|||||||||||.|||||.|||||||||||||||||
BSU28620___rn 451 AAAACCATTCCGTACAGCCTGCTGGTGTTAAAGAATGAAAAGTATAACAG 500
BSNT_04175___ 498 CATGCAGGAAAAAGGCATGAGCCAAGGGAAAATGAAAGCTTTGCTGCACA 547
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 501 CATGCAGGAAAAAGGCATGAGCCAAGGGAAAATGAAAGCTTTGCTGCACA 550
BSNT_04175___ 548 ATCAGGCGATCACCCATTTATTAAGAAAATTGGATGGAGTAAAGCCTGAA 597
|||||||||||||.||||||||||||||||||||||||||||||||||||
BSU28620___rn 551 ATCAGGCGATCACACATTTATTAAGAAAATTGGATGGAGTAAAGCCTGAA 600
BSNT_04175___ 598 GCCATTTTGATTGACCAATTCGCTGAGCCAGGCGTCTACTTCAATCATTT 647
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 601 GCCATTTTGATTGACCAATTCGCTGAGCCAGGCGTCTACTTCAATCATTT 650
BSNT_04175___ 648 AAAGGGCAGAGACATTGTGAAGGAGCGGACCTATTTTAGCACAAAAGCTG 697
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 651 AAAGGGCAGAGACATTGTGAAGGAGCGGACCTATTTTAGCACAAAAGCTG 700
BSNT_04175___ 698 AAGGTATTCACCTGGCTGTCGCCGCTGCTTCAATCATTGCAAGATATTCG 747
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28620___rn 701 AAGGTATTCACCTGGCTGTCGCCGCTGCTTCAATCATTGCAAGATATTCA 750
BSNT_04175___ 748 TTTTTAATGGAAATGGATAAACTATCACGCGAGGCAGGAATGACGCTTCC 797
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU28620___rn 751 TTTTTAATGGAAATGGATAAACTATCACGCGCGGCAGGAATGACGCTTCC 800
BSNT_04175___ 798 AAAAGGGGCCGGTCCTCACGTCGATGAAGCGGCCGCCAAGCTGATCCTCA 847
|||||||||||||||.||||||||||||||||||||||||||||||||||
BSU28620___rn 801 AAAAGGGGCCGGTCCGCACGTCGATGAAGCGGCCGCCAAGCTGATCCTCA 850
BSNT_04175___ 848 AAAAAGGGGCATCTGCACTCAGAACCTTTACAAAACTCCATTTCGCCAAT 897
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 851 AAAAAGGGGCATCTGCACTCAGAACCTTTACAAAACTCCATTTCGCCAAT 900
BSNT_04175___ 898 ACGCAAAAAGCGCAGCGCCTTGCTGATAAAAAACGTTCATAG 939
||||||||||||||||||||||||||||||||||||||||||
BSU28620___rn 901 ACGCAAAAAGCGCAGCGCCTTGCTGATAAAAAACGTTCATAG 942
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