Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04167 and BSU28550

See Amino acid alignment / Visit BSNT_04167 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence dna-align/BSNT_04167___ysiA.1.22522.seq
#    -bsequence dna-align/BSU28550___fadR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04167___ysiA-BSU28550___fadR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04167___ysiA-BSU28550___fadR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04167___ysiA
# 2: BSU28550___fadR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 585
# Identity:     573/585 (97.9%)
# Similarity:   573/585 (97.9%)
# Gaps:           0/585 ( 0.0%)
# Score: 2817.0
# 
#
#=======================================

BSNT_04167___      1 TTGAAGCAAAAACGGCCAAAGTATATGCAGATTATTGATGCAGCAGTAGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa      1 TTGAAGCAAAAACGGCCAAAGTATATGCAGATTATTGATGCAGCAGTAGA     50

BSNT_04167___     51 AGTCATTGCAGAAAACGGCTACCACCAGTCACAGGTATCCAAAATTGCCA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa     51 AGTCATTGCAGAAAACGGCTACCACCAGTCACAGGTATCCAAAATTGCCA    100

BSNT_04167___    101 AACAAGCTGGGGTAGCGGACGGCACCATCTATCTCTATTTTAAAAACAAA    150
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa    101 AACAAGCCGGGGTAGCGGACGGCACCATCTATCTCTATTTTAAAAACAAA    150

BSNT_04167___    151 GAAGATATTTTAATTTCTCTTTTCAAAGAAAAAATGGGTCAATTTATTGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa    151 GAAGATATTTTAATTTCTCTTTTCAAAGAAAAAATGGGTCAATTTATTGA    200

BSNT_04167___    201 GCGGATGGAAGAGGACATTAAAGAAAAAGCAACAGCGAAAGAGAAATTGG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa    201 GCGGATGGAAGAGGACATTAAAGAAAAAGCAACAGCGAAAGAGAAATTGG    250

BSNT_04167___    251 CGCTTGTGATTTCAAAGCATTTTTCCCTTTTAGCGGGTGACCATAATCTC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa    251 CGCTTGTGATTTCAAAGCATTTTTCCCTTTTAGCGGGTGACCATAATCTC    300

BSNT_04167___    301 GCAATTGTCACGCAGCTTGAGCTCCGCCAATCCAACTTGGAGCTGCGCCA    350
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa    301 GCCATTGTCACGCAGCTTGAGCTCCGCCAATCCAACTTGGAGCTGCGCCA    350

BSNT_04167___    351 AAAAATCAACGAAATATTAAAAGGCTACTTAAATATTTTGGATGGCATTT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28550___fa    351 AAAAATCAACGAAATATTAAAAGGCTACTTAAATATTTTGGATGGCATTT    400

BSNT_04167___    401 TGACGGAAGGCATACAATCAGGCGAATTAAAAGAAGGCCTCGACGTCCGC    450
                     ||||||||||.|||||||||||||||.||||||||||||||||.||||||
BSU28550___fa    401 TGACGGAAGGTATACAATCAGGCGAAATAAAAGAAGGCCTCGATGTCCGC    450

BSNT_04167___    451 CTCGCCCGGCAGATGATTTTTGGAACGATTGACGAAACCGTGACAACATG    500
                     ||||||||||||||||||||||||||||||||||||||.||||||||.||
BSU28550___fa    451 CTCGCCCGGCAGATGATTTTTGGAACGATTGACGAAACTGTGACAACTTG    500

BSNT_04167___    501 GGTGATGAATGACCAAAAGTACGATCTTGCTGCGCTTTCAGACAGCGTTT    550
                     |||||||||||||||||||||||||||.|.||||||||||.|||||||||
BSU28550___fa    501 GGTGATGAATGACCAAAAGTACGATCTCGTTGCGCTTTCAAACAGCGTTT    550

BSNT_04167___    551 TAGAATTATTGGTGTCCGGAATTCATAATAAGTAA    585
                     |||||||||||||.|||||||||||.|||||||||
BSU28550___fa    551 TAGAATTATTGGTATCCGGAATTCACAATAAGTAA    585


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