Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04162 and BSU28520

See Amino acid alignment / Visit BSNT_04162 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:33
# Commandline: needle
#    -asequence dna-align/BSNT_04162___etfA.1.22522.seq
#    -bsequence dna-align/BSU28520___etfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04162___etfA-BSU28520___etfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04162___etfA-BSU28520___etfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04162___etfA
# 2: BSU28520___etfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 978
# Identity:     961/978 (98.3%)
# Similarity:   961/978 (98.3%)
# Gaps:           0/978 ( 0.0%)
# Score: 4737.0
# 
#
#=======================================

BSNT_04162___      1 ATGGGAAAAAAAGTGATCGTGCTTGGAGAAATACGCGATGGGGAATTGCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et      1 ATGGGAAAAAAAGTGATCGTGCTTGGAGAAATACGCGATGGGGAATTGCG     50

BSNT_04162___     51 GAATGTCACCTTTGAAGCAATAGCTGCAGGAAGAACCATTTCAGGAGATG    100
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et     51 AAATGTCACCTTTGAAGCAATAGCTGCAGGAAGAACCATTTCAGGAGATG    100

BSNT_04162___    101 GGGAAGTCATCGGTGTTCTCATCGGTGAAAATGTACAAAGCATTGCACAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    101 GGGAAGTCATCGGTGTTCTCATCGGTGAAAATGTACAAAGCATTGCACAA    150

BSNT_04162___    151 GAGCTTATTCATTACGGAGCAGATAAAGTTCTTACCGCTGAGGACCCGAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    151 GAGCTTATTCATTACGGAGCAGATAAAGTTCTTACCGCTGAGGACCCGAA    200

BSNT_04162___    201 GCTGAAAACATACACGGCAGACGGGTACAGCCAGGTCATGAGAGGTGTTA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    201 GCTGAAAACATACACGGCAGACGGGTACAGCCAGGTCATGAGAGGTGTTA    250

BSNT_04162___    251 TCGAGCAAGAAAATCCTGATTCAGTCATCTTCGGGCATACGGCAATGGGC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    251 TCGAGCAAGAAAATCCTGATTCAGTCATCTTCGGGCATACGGCAATGGGC    300

BSNT_04162___    301 AAGGATCTTTCACCGAAGCTTGCTGCCCGGCTGCAAACAGGCTTAATTTC    350
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU28520___et    301 AAGGATCTTTCACCGAAGCTTGCTGCCCGTCTGCAAACAGGCTTAATTTC    350

BSNT_04162___    351 TGATGCTATAGATGTAAGCGTTACCGGAGGGAATGTTGTGTTCACACGGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    351 TGATGCTATAGATGTAAGCGTTACCGGAGGGAATGTTGTGTTCACACGGC    400

BSNT_04162___    401 CGATTTACTCGGGGAAAGCTTTTGAACGCGTCATTTCAACCGATCCGATG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    401 CGATTTACTCGGGGAAAGCTTTTGAACGCGTCATTTCAACCGATCCGATG    450

BSNT_04162___    451 ATCTTTGCAACAATTCGCCCCAATAACATTCAAGCTTCAGAAAAAGACAT    500
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28520___et    451 ATCTTTGCAACAATTCGCCCCAATAACATTCAAGCTTCAGAAAAAGACAC    500

BSNT_04162___    501 CAGCAGATCGGGAAGCATCGAAAGCATAAATGTCTCTCTTACTGACCTTC    550
                     ||||||||||||.||||||||||||||..||||.||||||||||||||.|
BSU28520___et    501 CAGCAGATCGGGGAGCATCGAAAGCATTGATGTTTCTCTTACTGACCTCC    550

BSNT_04162___    551 GCACCGTGATTCAAGAGGTCGTCAAAAAAACAGCTGACGGTGTTGATCTC    600
                     ||||.||.||.|||||||||||.||||||||.||.|||||||||||||||
BSU28520___et    551 GCACTGTTATCCAAGAGGTCGTGAAAAAAACGGCGGACGGTGTTGATCTC    600

BSNT_04162___    601 TCCGAAGCGAAAATTATCGTTGCGGGCGGCCGAGGAGTCAAAAGTAAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU28520___et    601 TCCGAAGCGAAAATTATCGTTGCGGGCGGCCGAGGAGTCAAAAGCAAGGA    650

BSNT_04162___    651 AGGATTTCAGCCGCTGCAGGAGCTTGCAGAGGTGCTAGGGGCCGCAGTCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    651 AGGATTTCAGCCGCTGCAGGAGCTTGCAGAGGTGCTAGGGGCCGCAGTCG    700

BSNT_04162___    701 GGGCTTCTCGCGGGGCATGTGACGCTGATTATTGCGATTATGCTCTCCAA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    701 GGGCTTCTCGCGGGGCATGTGACGCTGATTATTGCGATTATGCTCTCCAA    750

BSNT_04162___    751 ATCGGGCAGACCGGGAAAGTCGTTACTCCGGATTTGTACATTGCATGCGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    751 ATCGGGCAGACCGGGAAAGTCGTTACTCCGGATTTGTACATTGCATGCGG    800

BSNT_04162___    801 CATTTCCGGCGCCATCCAGCATTTGGCCGGCATGTCAAACAGCAAGGTGA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    801 CATTTCCGGCGCCATCCAGCATTTGGCCGGCATGTCAAACAGCAAGGTGA    850

BSNT_04162___    851 TCGTCGCCATCAATAAAGACCCCGAAGCCGATATCTTTAAAATAGCGGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    851 TCGTCGCCATCAATAAAGACCCCGAAGCCGATATCTTTAAAATAGCGGAT    900

BSNT_04162___    901 TACGGCATCGTCGGTGATTTATTTGAAGTTGTCCCGTTATTAACTGAGGA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28520___et    901 TACGGCATCGTCGGTGATTTATTTGAAGTTGTCCCGTTATTAACTGAGGA    950

BSNT_04162___    951 ATTCAAACAATTGAATATACACTCATAA    978
                     |||||||||..|||||||||||||||||
BSU28520___et    951 ATTCAAACAGCTGAATATACACTCATAA    978


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04162 and BSU28520

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
