Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04150 and BSU28450

See Amino acid alignment / Visit BSNT_04150 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:32
# Commandline: needle
#    -asequence dna-align/BSNT_04150___sdhC.1.22522.seq
#    -bsequence dna-align/BSU28450___sdhC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04150___sdhC-BSU28450___sdhC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04150___sdhC-BSU28450___sdhC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04150___sdhC
# 2: BSU28450___sdhC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 609
# Identity:     602/609 (98.9%)
# Similarity:   602/609 (98.9%)
# Gaps:           0/609 ( 0.0%)
# Score: 2982.0
# 
#
#=======================================

BSNT_04150___      1 ATGTCTGGGAACAGAGAGTTTTATTTTCGAAGATTGCATTCCTTGCTTGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd      1 ATGTCTGGGAACAGAGAGTTTTATTTTCGAAGATTGCATTCCTTGCTTGG     50

BSNT_04150___     51 CGTCATACCGGTCGGCATCTTTCTCATTCAGCATTTAGTCGTCAACCAGT    100
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU28450___sd     51 CGTCATACCGGTCGGCATCTTTCTTATTCAGCATTTAGTCGTCAACCAGT    100

BSNT_04150___    101 TTGCCGCAAGGGGCGCTGAAGCATTCAATAGCGCTGCTCATTTTATGGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    101 TTGCCGCAAGGGGCGCTGAAGCATTCAATAGCGCTGCTCATTTTATGGAT    150

BSNT_04150___    151 AGTCTGCCTTTCAGGTATGCCTTGGAAATTTTTATTATCTTCTTACCATT    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    151 AGCCTGCCTTTCAGGTATGCCTTGGAAATTTTTATTATCTTCTTACCATT    200

BSNT_04150___    201 AATTTATCATGCAGTTTATGGTGTGTACATAGCGTTTACTGCGAAAAATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    201 AATTTATCATGCAGTTTATGGTGTGTACATAGCGTTTACTGCGAAAAATA    250

BSNT_04150___    251 ACGCAGGCCAATACAGCTACATGAGAAACTGGCTATTCGTCCTGCAGCGT    300
                     ||||.||.||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    251 ACGCCGGTCAATACAGCTACATGAGAAACTGGCTATTCGTCCTGCAGCGT    300

BSNT_04150___    301 GTAACCGGTATCATCACCCTCATTTTCGTCAGCTGGCACGTGTGGGAAAC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    301 GTAACCGGTATCATCACCCTCATTTTCGTCAGCTGGCACGTGTGGGAAAC    350

BSNT_04150___    351 CCGCATTGCTGCACAAATGGGCGCTGAGGTCAATTTCGACATGATGGCGA    400
                     |||||||||.|||||||||||.||||||||||||||||||||||||||||
BSU28450___sd    351 CCGCATTGCCGCACAAATGGGTGCTGAGGTCAATTTCGACATGATGGCGA    400

BSNT_04150___    401 ATATTTTGAGCTCTCCGGCTATGCTTGGTTTTTACATTGTCGGTGTTTTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    401 ATATTTTGAGCTCTCCGGCTATGCTTGGTTTTTACATTGTCGGTGTTTTA    450

BSNT_04150___    451 TCAACAATTTTCCACTTCTCGAACGGTTTATGGTCTTTCGCTGTTACATG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    451 TCAACAATTTTCCACTTCTCGAACGGTTTATGGTCTTTCGCTGTTACATG    500

BSNT_04150___    501 GGGCATCACGGTAACGCCTCGTTCTCAAAGAATTTCGACATACGTTACGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28450___sd    501 GGGCATCACGGTAACGCCTCGTTCTCAAAGAATTTCGACATACGTTACGC    550

BSNT_04150___    551 TGATTATTTTTGTTGCACTGTCATACGTAGGCTTAAAAGCGATTTTCGCA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU28450___sd    551 TGATTATTTTTGTTGCACTGTCATACGTAGGCTTAAAAGCGATTTTTGCA    600

BSNT_04150___    601 TTTGTTTAA    609
                     |||||||||
BSU28450___sd    601 TTTGTTTAA    609


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