Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04146 and BSU28420
See
Amino acid alignment /
Visit
BSNT_04146 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_04146___ysmA.1.22522.seq
# -bsequence dna-align/BSU28420___ysmA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04146___ysmA-BSU28420___ysmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04146___ysmA-BSU28420___ysmA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04146___ysmA
# 2: BSU28420___ysmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 444
# Identity: 438/444 (98.6%)
# Similarity: 438/444 (98.6%)
# Gaps: 0/444 ( 0.0%)
# Score: 2166.0
#
#
#=======================================
BSNT_04146___ 1 ATGAAGCTTCCCGCTTATATTGATATGCCGTTTCAAGAATGGAAAACATC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28420___ys 1 ATGAAGCTTCCCGCTTATATTGATATGCCGTTTCAAGAATGGAAAACATC 50
BSNT_04146___ 51 CTTTTCTTTTTTCAATGAGGTATCCGTAAGATTTTCCGAGACAGACATGT 100
||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU28420___ys 51 CTTTTCTTTTTTCAATAAGGTATCCGTAAGATTTTCCGAGACAGACATGT 100
BSNT_04146___ 101 TTGGGCATATGAATAATGTAACCCCTTTTATATATTTTGAGGAGGCGCGG 150
|||||||||||||||||||||||||||||||||||||||||||||.||||
BSU28420___ys 101 TTGGGCATATGAATAATGTAACCCCTTTTATATATTTTGAGGAGGTGCGG 150
BSNT_04146___ 151 ATTTCTTATTTTAAAAAGCTGAATATGATGAGTGAAAACAAACAGACCAT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28420___ys 151 ATTTCTTATTTTAAAAAGCTGAATATGATGAGTGAAAACAAACAGACCAT 200
BSNT_04146___ 201 GACAGTCGTGGCAAGCCAGCAATGCGATTATTTGCGCCAAGTCATGCCTT 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28420___ys 201 GACAGTCGTGGCAAGCCAGCAATGCGATTATTTGCGCCAAGTCATGCCTT 250
BSNT_04146___ 251 ATGAAGAGTTGCGCATCTATGTGAAAACAAGCACAGTCGGCAGTTCATCT 300
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU28420___ys 251 ATGAAGAGTTGCGCATCTATGTGAAAACAAGCGCAGTCGGCAGTTCATCT 300
BSNT_04146___ 301 CTTACCTTGCACTATCTCGGAGAGAACCGCGAAGGCGAGCCCTGCTTCAC 350
||||||||||||||||||||||||||||.|||||||||.|||||||||||
BSU28420___ys 301 CTTACCTTGCACTATCTCGGAGAGAACCTCGAAGGCGAACCCTGCTTCAC 350
BSNT_04146___ 351 CGGGGCAGTCGTGATGGTTCAAGTCTCAAAGGAAAGCGGCAAAGCTGTCA 400
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU28420___ys 351 CGGGGCAGTCGTGATGGTTCAAGTCTCAAAGGAAAGCGGCAAGGCTGTCA 400
BSNT_04146___ 401 GCTGGACGGATGAGGAGAAAGAAACGCTTCTTCATACACGATAA 444
||||||||||||||||||||||||||||||||||||||||||||
BSU28420___ys 401 GCTGGACGGATGAGGAGAAAGAAACGCTTCTTCATACACGATAA 444
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.