Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04143 and BSU28400

See Amino acid alignment / Visit BSNT_04143 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence dna-align/BSNT_04143___ysmB.1.22522.seq
#    -bsequence dna-align/BSU28400___ysmB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04143___ysmB-BSU28400___ysmB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04143___ysmB-BSU28400___ysmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04143___ysmB
# 2: BSU28400___ysmB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 441
# Identity:     439/441 (99.5%)
# Similarity:   439/441 (99.5%)
# Gaps:           0/441 ( 0.0%)
# Score: 2187.0
# 
#
#=======================================

BSNT_04143___      1 ATGACATCAAAACCTTTGGAGCATGTTGCGGATATTGAAAAGTCACTCCG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28400___ys      1 ATGACATCAAAACCTTTGGAGCATGTTGCGGATATTGAAAAGTCACTCCG     50

BSNT_04143___     51 CCACATTGCCGCGATCATTAAGCAAAAAGGACGAGAAATCCTTAACCAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28400___ys     51 CCACATTGCCGCGATCATTAAGCAAAAAGGACGAGAAATCCTTAACCAAT    100

BSNT_04143___    101 ATGCGATTACGCCGCCGCAATTTGTCGGCTTGCAATGGCTTTATGAATTA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28400___ys    101 ATGCGATTACGCCGCCGCAATTTGTCGGCTTGCAATGGCTTTATGAATTA    150

BSNT_04143___    151 GGAGATATGACAATCGGTGAATTATCGGGCAAAATGTATCTGGCATGCAG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28400___ys    151 GGAGATATGACAATCGGTGAATTATCGGGCAAAATGTATCTGGCATGCAG    200

BSNT_04143___    201 CACGACAACGGACTTAATCGACCGCATGCAAAAAAATGAGCTTGTGGAGC    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU28400___ys    201 CACGACAACGGACTTAATCGACCGCATGCAAAAAAATGAGCTTGTTGAGC    250

BSNT_04143___    251 GGGTCAAGGACCCGGCGGACAGACGTGTTGTCCGGATACATCTGCTGCCT    300
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU28400___ys    251 GGGTCAAGGACCCGGCGGACAGACGTGTTGTCAGGATACATCTGCTGCCT    300

BSNT_04143___    301 GAAGGAGAACGGATTATCCAAGAGGTCATTACAAAAAGACAGGAATATCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28400___ys    301 GAAGGAGAACGGATTATCCAAGAGGTCATTACAAAAAGACAGGAATATCT    350

BSNT_04143___    351 GCGTGATATGTTCGAATCGTTTACAGATGAAGAAATAGCCATCTTCGAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28400___ys    351 GCGTGATATGTTCGAATCGTTTACAGATGAAGAAATAGCCATCTTCGAAA    400

BSNT_04143___    401 AATCTTTGATGAAACTGCAGCATGAAATGAAGAGAAAATGA    441
                     |||||||||||||||||||||||||||||||||||||||||
BSU28400___ys    401 AATCTTTGATGAAACTGCAGCATGAAATGAAGAGAAAATGA    441


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