Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04141 and BSU28380
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:31
# Commandline: needle
# -asequence dna-align/BSNT_04141___gerM.1.22522.seq
# -bsequence dna-align/BSU28380___gerM.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04141___gerM-BSU28380___gerM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04141___gerM-BSU28380___gerM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04141___gerM
# 2: BSU28380___gerM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity: 1090/1101 (99.0%)
# Similarity: 1090/1101 (99.0%)
# Gaps: 0/1101 ( 0.0%)
# Score: 5406.0
#
#
#=======================================
BSNT_04141___ 1 ATGCTGAAAAAAGGACCTGCAGTCATTGGTGCCACTTGTCTCACCTCTGC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 1 ATGCTGAAAAAAGGACCTGCAGTCATTGGTGCCACTTGTCTCACCTCTGC 50
BSNT_04141___ 51 CTTGCTTTTATCCGGATGCGGTTTGTTTCAATCTGATAAGGCAGCCGAGG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 51 CTTGCTTTTATCCGGATGCGGTTTGTTTCAATCTGATAAGGCAGCCGAGG 100
BSNT_04141___ 101 AAATTGATCCGCCTCAAGACGTTACATTCGTGAACGATGAAGCGGGTGCC 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 101 AAATTGATCCGCCTCAAGACGTTACATTCGTGAACGATGAAGCGGGTGCC 150
BSNT_04141___ 151 AATTCAAATACAACAGCAGCCAAAAAAACAGAAAGTGAAAAAAGCGATAC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 151 AATTCAAATACAACAGCAGCCAAAAAAACAGAAAGTGAAAAAAGCGATAC 200
BSNT_04141___ 201 CGCAAAAGCGGATCAAGCCTCATCTACTGTTATGAGGGAGCTTTATCTCA 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 201 CGCAAAAGCGGATCAAGCCTCATCTACTGTTATGAGGGAGCTTTATCTCA 250
BSNT_04141___ 251 TTGATAAAAACGGATATGTTGTTGCGCAAACGCTGCCTCTCCCTAAAAGT 300
|||||||||||||.||||||||||||||||||||||||||.|||||||||
BSU28380___ge 251 TTGATAAAAACGGGTATGTTGTTGCGCAAACGCTGCCTCTTCCTAAAAGT 300
BSNT_04141___ 301 GAGAGCACGGCTAAGCAGGCGCTTGAATACCTCGTACAGGGCGGGCCTGT 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 301 GAGAGCACGGCTAAGCAGGCGCTTGAATACCTCGTACAGGGCGGGCCTGT 350
BSNT_04141___ 351 GTCTGAAATTCTTCCGAATGGCTTCAGAGCTGTATTGCCGGCTGACACCA 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 351 GTCTGAAATTCTTCCGAATGGCTTCAGAGCTGTATTGCCGGCTGACACCA 400
BSNT_04141___ 401 CCGTTAACGTTGACATCAAAAAAGATGGAACCGCGATAGCTGATTTCTCT 450
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU28380___ge 401 CCGTTAACGTTGACATCAAAAAAGATGGAACGGCGATAGCTGATTTCTCT 450
BSNT_04141___ 451 AATGAGTTCAAAAATTATAAGAAAGAGGACGAACAGAAAATCGTTCAATC 500
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28380___ge 451 AATGAGTTCAAAAATTATAAGAAAGAAGACGAACAGAAAATCGTTCAATC 500
BSNT_04141___ 501 TGTGACGTGGACGCTGACGCAATTTAGTTCGATAGATAAAGTGAAGCTGA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 501 TGTGACGTGGACGCTGACGCAATTTAGTTCGATAGATAAAGTGAAGCTGA 550
BSNT_04141___ 551 GAATAAACGGGCATGAACTGAAGGAGATGCCTGTAGGAGGGACGCCGATC 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 551 GAATAAACGGGCATGAACTGAAGGAGATGCCTGTAGGAGGGACGCCGATC 600
BSNT_04141___ 601 TCAGATGATTTAAGCCGCAAAGACGGCATTAATTTGGAAACAGCCGGTGT 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 601 TCAGATGATTTAAGCCGCAAAGACGGCATTAATTTGGAAACAGCCGGTGT 650
BSNT_04141___ 651 AAATGATCTCACTGCTACCCATCCGCTGACAGTCTACTACTTGGCGGAAA 700
|||||||||||||||||||||||||||||||||||||||.||||||||||
BSU28380___ge 651 AAATGATCTCACTGCTACCCATCCGCTGACAGTCTACTATTTGGCGGAAA 700
BSNT_04141___ 701 ACGAAGACAGTGAATACTACGTGCCGGTGACGAAACGAATCGACAATTCG 750
|.|||||||||||||||||||||||||||||.||||||||||||||||||
BSU28380___ge 701 ATGAAGACAGTGAATACTACGTGCCGGTGACCAAACGAATCGACAATTCG 750
BSNT_04141___ 751 GAAAAAGACGACATCACAGCAGCCATTAATGAATTGGCTAAAGGCCCAAG 800
||||||||||||||||||||||||||||||||||||||||||||.||.||
BSU28380___ge 751 GAAAAAGACGACATCACAGCAGCCATTAATGAATTGGCTAAAGGGCCGAG 800
BSNT_04141___ 801 CAAGGTGAGCGGGCTGTTAACAGACTTCAGTGAAGATGTAAAGCTGGTCA 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 801 CAAGGTGAGCGGGCTGTTAACAGACTTCAGTGAAGATGTAAAGCTGGTCA 850
BSNT_04141___ 851 GCAAACCGAAAATCAAAGACGGGCGCGTGACGTTGGATTTCAATCAATCT 900
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 851 GCAAACCGAAAATCAAAGACGGGCGCGTGACGTTGGATTTCAATCAATCT 900
BSNT_04141___ 901 ATATTCGGCAGCGCCGATGAGAAGACGAAAATGATTTCTTCAGAAGTGCT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 901 ATATTCGGCAGCGCCGATGAGAAGACGAAAATGATTTCTTCAGAAGTGCT 950
BSNT_04141___ 951 GAACAGCATTGTGCTGACGTTAACGGAGCAGCCGGATGTAAAAAGCGTCT 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge 951 GAACAGCATTGTGCTGACGTTAACGGAGCAGCCGGATGTAAAAAGCGTCT 1000
BSNT_04141___ 1001 CTGTTAAAGTGAACGGAAAATCAGAGCTTGTAAATGAAAAAGGCGAAAAG 1050
||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU28380___ge 1001 CTGTTAAAGTGAACGGAAAATCAGAGCTGGTAAATGAAAAAGGCGAAAAG 1050
BSNT_04141___ 1051 CTCACAGAACCGGTCTCCAGACCTTCTCAAGTGAATACGGGTAGTTTTTA 1100
|||||||||||||||||||||||.||||||||||||||||||||||||||
BSU28380___ge 1051 CTCACAGAACCGGTCTCCAGACCATCTCAAGTGAATACGGGTAGTTTTTA 1100
BSNT_04141___ 1101 A 1101
|
BSU28380___ge 1101 A 1101
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