Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04141 and BSU28380

See Amino acid alignment / Visit BSNT_04141 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:31
# Commandline: needle
#    -asequence dna-align/BSNT_04141___gerM.1.22522.seq
#    -bsequence dna-align/BSU28380___gerM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04141___gerM-BSU28380___gerM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04141___gerM-BSU28380___gerM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04141___gerM
# 2: BSU28380___gerM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1101
# Identity:    1090/1101 (99.0%)
# Similarity:  1090/1101 (99.0%)
# Gaps:           0/1101 ( 0.0%)
# Score: 5406.0
# 
#
#=======================================

BSNT_04141___      1 ATGCTGAAAAAAGGACCTGCAGTCATTGGTGCCACTTGTCTCACCTCTGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge      1 ATGCTGAAAAAAGGACCTGCAGTCATTGGTGCCACTTGTCTCACCTCTGC     50

BSNT_04141___     51 CTTGCTTTTATCCGGATGCGGTTTGTTTCAATCTGATAAGGCAGCCGAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge     51 CTTGCTTTTATCCGGATGCGGTTTGTTTCAATCTGATAAGGCAGCCGAGG    100

BSNT_04141___    101 AAATTGATCCGCCTCAAGACGTTACATTCGTGAACGATGAAGCGGGTGCC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    101 AAATTGATCCGCCTCAAGACGTTACATTCGTGAACGATGAAGCGGGTGCC    150

BSNT_04141___    151 AATTCAAATACAACAGCAGCCAAAAAAACAGAAAGTGAAAAAAGCGATAC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    151 AATTCAAATACAACAGCAGCCAAAAAAACAGAAAGTGAAAAAAGCGATAC    200

BSNT_04141___    201 CGCAAAAGCGGATCAAGCCTCATCTACTGTTATGAGGGAGCTTTATCTCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    201 CGCAAAAGCGGATCAAGCCTCATCTACTGTTATGAGGGAGCTTTATCTCA    250

BSNT_04141___    251 TTGATAAAAACGGATATGTTGTTGCGCAAACGCTGCCTCTCCCTAAAAGT    300
                     |||||||||||||.||||||||||||||||||||||||||.|||||||||
BSU28380___ge    251 TTGATAAAAACGGGTATGTTGTTGCGCAAACGCTGCCTCTTCCTAAAAGT    300

BSNT_04141___    301 GAGAGCACGGCTAAGCAGGCGCTTGAATACCTCGTACAGGGCGGGCCTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    301 GAGAGCACGGCTAAGCAGGCGCTTGAATACCTCGTACAGGGCGGGCCTGT    350

BSNT_04141___    351 GTCTGAAATTCTTCCGAATGGCTTCAGAGCTGTATTGCCGGCTGACACCA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    351 GTCTGAAATTCTTCCGAATGGCTTCAGAGCTGTATTGCCGGCTGACACCA    400

BSNT_04141___    401 CCGTTAACGTTGACATCAAAAAAGATGGAACCGCGATAGCTGATTTCTCT    450
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU28380___ge    401 CCGTTAACGTTGACATCAAAAAAGATGGAACGGCGATAGCTGATTTCTCT    450

BSNT_04141___    451 AATGAGTTCAAAAATTATAAGAAAGAGGACGAACAGAAAATCGTTCAATC    500
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU28380___ge    451 AATGAGTTCAAAAATTATAAGAAAGAAGACGAACAGAAAATCGTTCAATC    500

BSNT_04141___    501 TGTGACGTGGACGCTGACGCAATTTAGTTCGATAGATAAAGTGAAGCTGA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    501 TGTGACGTGGACGCTGACGCAATTTAGTTCGATAGATAAAGTGAAGCTGA    550

BSNT_04141___    551 GAATAAACGGGCATGAACTGAAGGAGATGCCTGTAGGAGGGACGCCGATC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    551 GAATAAACGGGCATGAACTGAAGGAGATGCCTGTAGGAGGGACGCCGATC    600

BSNT_04141___    601 TCAGATGATTTAAGCCGCAAAGACGGCATTAATTTGGAAACAGCCGGTGT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    601 TCAGATGATTTAAGCCGCAAAGACGGCATTAATTTGGAAACAGCCGGTGT    650

BSNT_04141___    651 AAATGATCTCACTGCTACCCATCCGCTGACAGTCTACTACTTGGCGGAAA    700
                     |||||||||||||||||||||||||||||||||||||||.||||||||||
BSU28380___ge    651 AAATGATCTCACTGCTACCCATCCGCTGACAGTCTACTATTTGGCGGAAA    700

BSNT_04141___    701 ACGAAGACAGTGAATACTACGTGCCGGTGACGAAACGAATCGACAATTCG    750
                     |.|||||||||||||||||||||||||||||.||||||||||||||||||
BSU28380___ge    701 ATGAAGACAGTGAATACTACGTGCCGGTGACCAAACGAATCGACAATTCG    750

BSNT_04141___    751 GAAAAAGACGACATCACAGCAGCCATTAATGAATTGGCTAAAGGCCCAAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||.||.||
BSU28380___ge    751 GAAAAAGACGACATCACAGCAGCCATTAATGAATTGGCTAAAGGGCCGAG    800

BSNT_04141___    801 CAAGGTGAGCGGGCTGTTAACAGACTTCAGTGAAGATGTAAAGCTGGTCA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    801 CAAGGTGAGCGGGCTGTTAACAGACTTCAGTGAAGATGTAAAGCTGGTCA    850

BSNT_04141___    851 GCAAACCGAAAATCAAAGACGGGCGCGTGACGTTGGATTTCAATCAATCT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    851 GCAAACCGAAAATCAAAGACGGGCGCGTGACGTTGGATTTCAATCAATCT    900

BSNT_04141___    901 ATATTCGGCAGCGCCGATGAGAAGACGAAAATGATTTCTTCAGAAGTGCT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    901 ATATTCGGCAGCGCCGATGAGAAGACGAAAATGATTTCTTCAGAAGTGCT    950

BSNT_04141___    951 GAACAGCATTGTGCTGACGTTAACGGAGCAGCCGGATGTAAAAAGCGTCT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28380___ge    951 GAACAGCATTGTGCTGACGTTAACGGAGCAGCCGGATGTAAAAAGCGTCT   1000

BSNT_04141___   1001 CTGTTAAAGTGAACGGAAAATCAGAGCTTGTAAATGAAAAAGGCGAAAAG   1050
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU28380___ge   1001 CTGTTAAAGTGAACGGAAAATCAGAGCTGGTAAATGAAAAAGGCGAAAAG   1050

BSNT_04141___   1051 CTCACAGAACCGGTCTCCAGACCTTCTCAAGTGAATACGGGTAGTTTTTA   1100
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU28380___ge   1051 CTCACAGAACCGGTCTCCAGACCATCTCAAGTGAATACGGGTAGTTTTTA   1100

BSNT_04141___   1101 A   1101
                     |
BSU28380___ge   1101 A   1101


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