Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04111 and BSU28300

See Amino acid alignment / Visit BSNT_04111 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:29
# Commandline: needle
#    -asequence dna-align/BSNT_04111___ilvH.1.22522.seq
#    -bsequence dna-align/BSU28300___ilvH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04111___ilvH-BSU28300___ilvH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04111___ilvH-BSU28300___ilvH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04111___ilvH
# 2: BSU28300___ilvH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 526
# Identity:     510/526 (97.0%)
# Similarity:   510/526 (97.0%)
# Gaps:           8/526 ( 1.5%)
# Score: 2508.0
# 
#
#=======================================

BSNT_04111___      1 TTGAAAAGAATTATCACATTGACTGTGGTGAACCGCTCCGGGGTGTTAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28300___il      1 TTGAAAAGAATTATCACATTGACTGTGGTGAACCGCTCCGGGGTGTTAAA     50

BSNT_04111___     51 CCGGATCACCGGTCTATTCACAAAAAGGCATTACAACATTGAAAGCATTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28300___il     51 CCGGATCACCGGTCTATTCACAAAAAGGCATTACAACATTGAAAGCATTA    100

BSNT_04111___    101 CAGTTGGACACACAGAAACAGCCGGCGTTTCCAGAATCACCTTCGTCGTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28300___il    101 CAGTTGGACACACAGAAACAGCCGGCGTTTCCAGAATCACCTTCGTCGTT    150

BSNT_04111___    151 CATGTTGAAGGAGAAAATGATGTTGAACAGTTAACGAAACAGCTCAACAA    200
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU28300___il    151 CATGTTGAAGGTGAAAATGATGTTGAACAGTTAACGAAACAGCTCAACAA    200

BSNT_04111___    201 ACAGATTGATGTACTGAAAGTCACAGACATCACAAATCAATCGATTGTCC    250
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU28300___il    201 ACAGATTGATGTGCTGAAAGTCACAGACATCACAAATCAATCGATTGTCC    250

BSNT_04111___    251 AGAGGGAGCTGGCCTTAATCAAGGTTGTCTCCGCACCTTCAACGAGAACA    300
                     |||||||||||||||||||||||||||||||||||||||||||.||||||
BSU28300___il    251 AGAGGGAGCTGGCCTTAATCAAGGTTGTCTCCGCACCTTCAACAAGAACA    300

BSNT_04111___    301 GAGATTAATGGAATCATAGAACCGTTTAGAGCCTCTGTCGTTGATGTCAG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28300___il    301 GAGATTAATGGAATCATAGAACCGTTTAGAGCCTCTGTCGTTGATGTCAG    350

BSNT_04111___    351 CAGAGACAGCATCGTTGTTCAGGTGACAGGCGAATCTAACAAAATTGAAG    400
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU28300___il    351 CAGAGACAGCATCGTTGTTCAGGTGACAGGTGAATCTAACAAAATTGAAG    400

BSNT_04111___    401 CGCTTATTGAATTGTTGAAACCTTATGGCATTAAAGAAATCGCGAGAACA    450
                     ||||||||||.||.||.|||||||||||||||||||||||||||||||||
BSU28300___il    401 CGCTTATTGAGTTATTAAAACCTTATGGCATTAAAGAAATCGCGAGAACA    450

BSNT_04111___    451 GGTAC-ACGGCTTTTGCGAGGGGTACCCAGCAAAAGGCGTCATCCAATAA    499
                     ||||| |||||||||||||||||.||||||||||||||||||||||||||
BSU28300___il    451 GGTACAACGGCTTTTGCGAGGGGAACCCAGCAAAAGGCGTCATCCAATAA    500

BSNT_04111___    500 AACAATATCTATTGTATAAAACATAA    525
                     |||||||||||||||||||       
BSU28300___il    501 AACAATATCTATTGTATAA-------    519


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