Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04109 and BSU28280
See
Amino acid alignment /
Visit
BSNT_04109 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:29
# Commandline: needle
# -asequence dna-align/BSNT_04109___leuA.1.22522.seq
# -bsequence dna-align/BSU28280___leuA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04109___leuA-BSU28280___leuA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04109___leuA-BSU28280___leuA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04109___leuA
# 2: BSU28280___leuA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1557
# Identity: 1459/1557 (93.7%)
# Similarity: 1459/1557 (93.7%)
# Gaps: 63/1557 ( 4.0%)
# Score: 7155.0
#
#
#=======================================
BSNT_04109___ 0 -------------------------------------------------- 0
BSU28280___le 1 TTGCGCAAAATTAATTTTTTCGATACGACGCTTCGTGATGGTGAACAGTC 50
BSNT_04109___ 1 -------------TTGAATACACAGGAGAAACTTGCCATAGCTAAGCAGC 37
|||||||||||||||||||||||||||||||||||||
BSU28280___le 51 CCCTGGAGTGAACTTGAATACACAGGAGAAACTTGCCATAGCTAAGCAGC 100
BSNT_04109___ 38 TCGAAAGACTCGGGGCAGATATCATTGAAGCGGGATTTCCCGCTTCGTCC 87
|||||||||||||||||||.||||||||||||||||||||||||||||||
BSU28280___le 101 TCGAAAGACTCGGGGCAGACATCATTGAAGCGGGATTTCCCGCTTCGTCC 150
BSNT_04109___ 88 CGAGGTGACTTTTTAGCTGTTCAGGAAATCGCTAGAACCATTAAAAATTG 137
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU28280___le 151 CGAGGTGACTTTTTAGCTGTTCAGGAAATCGCAAGAACCATTAAAAATTG 200
BSNT_04109___ 138 TTCAGTGACTGGTCTGGCCCGTTGTGTAAAAGGTGATATTGATGCTGCTT 187
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 201 TTCAGTAACTGGTCTGGCCCGTTGTGTAAAAGGTGATATTGATGCTGCTT 250
BSNT_04109___ 188 GGGAAGCGTTAAAGGATGGTGCTTACCCGAGAATTCATGTTTTTATCGCC 237
|||||||||||||||||||.|||.|.||.|||||||||||.||||||||.
BSU28280___le 251 GGGAAGCGTTAAAGGATGGCGCTCAACCAAGAATTCATGTATTTATCGCG 300
BSNT_04109___ 238 ACATCGGACATTCATTTGAAACACAAGCTGAAAATGACACGTGAGCAAGT 287
||||||||||||||||||||.|||||||||||||||||||||||.|||||
BSU28280___le 301 ACATCGGACATTCATTTGAAGCACAAGCTGAAAATGACACGTGAACAAGT 350
BSNT_04109___ 288 CATTGAAAGAGCAGTTGAAATGGTGACATACGCAAAAGAACGTTTTCCGG 337
|||||||||||||||||.||||||||.||||||||||||||||||||||.
BSU28280___le 351 CATTGAAAGAGCAGTTGGAATGGTGAAATACGCAAAAGAACGTTTTCCGA 400
BSNT_04109___ 338 TTGTGCAATGGTCAGCTGAAGATGCCTGCCGCACTGAGCTGCCGTTTCTG 387
|||||||||||||||||||||||||||||||||||||.|||||||||||.
BSU28280___le 401 TTGTGCAATGGTCAGCTGAAGATGCCTGCCGCACTGAACTGCCGTTTCTA 450
BSNT_04109___ 388 GCAGAAATCGTCGAGAAAGTGATTGACGCAGGCGCCAGTGTTATCAATCT 437
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 451 GCAGAAATCGTCGAGAAAGTGATTGACGCAGGCGCCAGTGTTATCAATCT 500
BSNT_04109___ 438 TCCAGACACTGTCGGCTACCTGGCTCCAGCGGAATACGGAAATATCTTTA 487
|||.||||||||||||||||||||.||.||||||||||||||||||||||
BSU28280___le 501 TCCGGACACTGTCGGCTACCTGGCCCCGGCGGAATACGGAAATATCTTTA 550
BSNT_04109___ 488 AATATATGAAGGAAAACGTTCCGAACATTCACAAAGCAAAGCTTTCAGCC 537
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU28280___le 551 AATATATGAAAGAAAACGTTCCGAACATTCACAAAGCAAAGCTTTCAGCC 600
BSNT_04109___ 538 CACTGTCATGATGATTTAGGAATGGCAGTTGCAAACTCTCTTGCTGCGAT 587
|||||||||||||||||.|||||||||||.||||||||||||||||||||
BSU28280___le 601 CACTGTCATGATGATTTGGGAATGGCAGTCGCAAACTCTCTTGCTGCGAT 650
BSNT_04109___ 588 TGAAAATGGCGCTGATCAAATCGAATGCGCTGTGAACGGGATCGGTGAAA 637
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 651 TGAAAATGGCGCTGATCAAATCGAATGCGCTGTGAACGGGATCGGTGAAA 700
BSNT_04109___ 638 GAGCCGGAAACGCGGCATTAGAGGAAATTGCCGTAGCCCTCCATACCAGA 687
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 701 GAGCCGGAAACGCGGCATTAGAGGAAATTGCCGTAGCCCTCCATACCAGA 750
BSNT_04109___ 688 AAAGATTTCTACCAAGTCGAAACAGGCATTACACTGAACGAGATTAAGAG 737
||||||||||||||||||||||||||.|||||.|||||||||||||||||
BSU28280___le 751 AAAGATTTCTACCAAGTCGAAACAGGTATTACGCTGAACGAGATTAAGAG 800
BSNT_04109___ 738 AACAAGTGATTTAGTAAGCAAACTGACAGGCATGGCTGTCCCACGCAACA 787
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU28280___le 801 AACAAGTGATTTAGTAAGCAAACTGACAGGCATGGCTGTCCCGCGCAACA 850
BSNT_04109___ 788 AAGCGGTTGTTGGAGATAATGCATTTGCTCATGAATCAGGCATCCATCAG 837
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 851 AAGCGGTTGTTGGAGATAATGCATTTGCTCATGAATCAGGCATCCATCAG 900
BSNT_04109___ 838 GACGGCTTTTTAAAGGAAAAATCGACTTATGAAATTATTTCACCGGAGCT 887
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 901 GACGGCTTTTTAAAGGAAAAATCGACTTATGAAATTATTTCACCGGAGCT 950
BSNT_04109___ 888 TGTCGGCGTAACCGCAGATGCGCTTGTCCTAGGTAAACATTCCGGACGCC 937
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 951 TGTCGGCGTAACCGCAGATGCGCTTGTCCTAGGTAAACATTCCGGACGCC 1000
BSNT_04109___ 938 ACGCATTTAAAGACCGGCTGACTGCTTTAGGATTCCAATTTGACAGTGAA 987
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 1001 ACGCATTTAAAGACCGGCTGACTGCTTTAGGATTCCAATTTGACAGTGAA 1050
BSNT_04109___ 988 GAGATTAATAAATTCTTTACGATGTTCAAAGAGTTGACTGAGAAGAAAAA 1037
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 1051 GAGATTAATAAATTCTTTACGATGTTCAAAGAGTTGACTGAGAAGAAAAA 1100
BSNT_04109___ 1038 AGAAATCACTGATGAGGATCTTGTTTCTCTTATTTTAGAAGAAAAAGTAA 1087
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 1101 AGAAATCACTGATGAGGATCTTGTTTCTCTTATTTTAGAAGAAAAAGTAA 1150
BSNT_04109___ 1088 CAGATCGCAAGATTGGGTATGAATTTCTTTCTCTGCAAGTACATTACGGA 1137
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 1151 CAGATCGCAAGATTGGGTATGAATTTCTTTCTCTGCAAGTACATTACGGA 1200
BSNT_04109___ 1138 ACAAGTCAGGTCCCTACGGCTACTCTTTCGTTGAAAAATCAAGAAAATGC 1187
||||||||||||||||||||||||||.||.|||||||||||||||||.||
BSU28280___le 1201 ACAAGTCAGGTCCCTACGGCTACTCTATCTTTGAAAAATCAAGAAAACGC 1250
BSNT_04109___ 1188 AGAGCTTATTCAGGAAGCTGCAACTGGAGCTGGAAGTGTGGAAGCAATCT 1237
|.||||||||||||||||||||||||||||||||||.|||||||||||||
BSU28280___le 1251 ACAGCTTATTCAGGAAGCTGCAACTGGAGCTGGAAGCGTGGAAGCAATCT 1300
BSNT_04109___ 1238 ACAATACGCTTGAGCGCTGCATCGATAAGGACGTGGAGCTTTTAGACTAC 1287
|||||||||||||||||||||||||||||||.||||||||.|||||||||
BSU28280___le 1301 ACAATACGCTTGAGCGCTGCATCGATAAGGATGTGGAGCTCTTAGACTAC 1350
BSNT_04109___ 1288 CGCATTCAGTCTAACAGAAAAGGCGAAGATGCATTTGCCCAGGTGTATGT 1337
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU28280___le 1351 CGCATTCAGTCTAATAGAAAAGGCGAAGATGCATTTGCCCAGGTGTATGT 1400
BSNT_04109___ 1338 AAGAGTTTTGGTGAACGGAAAAGAATCAGCAGGTCGGGGCATAGCGCAAG 1387
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU28280___le 1401 AAGAGTTTTGGTGAACGGAAAAGAATCAGCAGGGCGGGGCATAGCGCAAG 1450
BSNT_04109___ 1388 ACGTATTAGAAGCATCAGCGAAAGCCTATTTGAACGCAGTCAACCGTCAA 1437
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU28280___le 1451 ACGTATTAGAAGCATCAGCGAAAGCCTATTTGAACGCAGTAAACCGTCAA 1500
BSNT_04109___ 1438 TTGGTTTTCCAGTCGAATATGAGCGGATTGAAAAACCACACAGCTGTCGG 1487
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28280___le 1501 TTGGTTTTCCAGTCGAATATGAGCGGATTGAAAAACCACACAGCTGTCGG 1550
BSNT_04109___ 1488 ATCATAA 1494
|||||||
BSU28280___le 1551 ATCATAA 1557
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.