Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04106 and BSU28250

See Amino acid alignment / Visit BSNT_04106 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence dna-align/BSNT_04106___leuD.1.22522.seq
#    -bsequence dna-align/BSU28250___leuD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04106___leuD-BSU28250___leuD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04106___leuD-BSU28250___leuD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04106___leuD
# 2: BSU28250___leuD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 600
# Identity:     592/600 (98.7%)
# Similarity:   592/600 (98.7%)
# Gaps:           0/600 ( 0.0%)
# Score: 2928.0
# 
#
#=======================================

BSNT_04106___      1 ATGGAACCTTTGAAATCACATACGGGGAAAGCAGCCGTATTAAATCGGAT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le      1 ATGGAACCTTTGAAATCACATACGGGGAAAGCAGCCGTATTAAATCGGAT     50

BSNT_04106___     51 CAATGTGGATACAGACCAGATTATTCCTAAGCAATTTTTGAAGAGGATTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le     51 CAATGTGGATACAGACCAGATTATTCCTAAGCAATTTTTGAAGAGGATTG    100

BSNT_04106___    101 AAAGAACAGGCTACGGGCGTTTTGCATTCTTTGACTGGAGATATGATGCG    150
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU28250___le    101 AAAGAACAGGCTACGGACGTTTTGCATTCTTTGACTGGAGATATGATGCG    150

BSNT_04106___    151 AATGGTGAACCGAACCCTGAATTTGAATTAAACCAGCCTGTTTATCAAGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le    151 AATGGTGAACCGAACCCTGAATTTGAATTAAACCAGCCTGTTTATCAAGG    200

BSNT_04106___    201 AGCTTCCATTTTAATAGCAGGAGAAAACTTCGGCTGCGGGTCATCGCGTG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le    201 AGCTTCCATTTTAATAGCAGGAGAAAACTTCGGCTGCGGGTCATCGCGTG    250

BSNT_04106___    251 AACACGCTCCGTGGGCACTTGATGATTATGGGTTTAAAATTATTATTGCA    300
                     |||||||||||||||||||||||||||||||||||||||||||.|||||.
BSU28250___le    251 AACACGCTCCGTGGGCACTTGATGATTATGGGTTTAAAATTATCATTGCG    300

BSNT_04106___    301 CCGTCATTTGCTGATATTTTCCATCAGAACTGCTTTAAAAACGGTATGCT    350
                     ||||||||.|||||||||||||||||||||||||||||||||||.|||||
BSU28250___le    301 CCGTCATTCGCTGATATTTTCCATCAGAACTGCTTTAAAAACGGCATGCT    350

BSNT_04106___    351 TCCGATCCGCATGCCATATGACAATTGGAAACAGCTTGTCGGCCAGTATG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le    351 TCCGATCCGCATGCCATATGACAATTGGAAACAGCTTGTCGGCCAGTATG    400

BSNT_04106___    401 AAAACCAGTCATTGCAAATGACAGTTGACCTTGAAAAGCAGCTGATTCAT    450
                     ||||||||||||||||||||||.||||||||||||||.||||||||||||
BSU28250___le    401 AAAACCAGTCATTGCAAATGACTGTTGACCTTGAAAATCAGCTGATTCAT    450

BSNT_04106___    451 GATAGTGAAGGCAATCAAATTTCATTTGAAGTTGATCCGCATTGGAAAGA    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le    451 GACAGTGAAGGCAATCAAATTTCATTTGAAGTTGATCCGCATTGGAAAGA    500

BSNT_04106___    501 GATGCTGATCAACGGATATGATGAAATTTCATTAACGCTGCTGCTGGAAG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le    501 GATGCTGATCAACGGATATGATGAAATTTCATTAACGCTGCTGCTGGAAG    550

BSNT_04106___    551 ATGAAATCAAGCAATTTGAATCACAAAGAAGCTCTTGGCTTCAAGCCTGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28250___le    551 ATGAAATCAAGCAATTTGAATCACAAAGAAGCTCTTGGCTTCAAGCCTGA    600


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