Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04103 and BSU28240

See Amino acid alignment / Visit BSNT_04103 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:28
# Commandline: needle
#    -asequence dna-align/BSNT_04103___ysoA.1.22522.seq
#    -bsequence dna-align/BSU28240___ysoA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04103___ysoA-BSU28240___ysoA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04103___ysoA-BSU28240___ysoA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04103___ysoA
# 2: BSU28240___ysoA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1005
# Identity:     990/1005 (98.5%)
# Similarity:   990/1005 (98.5%)
# Gaps:           0/1005 ( 0.0%)
# Score: 4890.0
# 
#
#=======================================

BSNT_04103___      1 ATGACGCATGACAAGAAGAACGCAAAAATTATTCCTTTTCCTCATCTGAA     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU28240___ys      1 ATGACGCATGACAAGAAAAACGCAAAAATTATTCCTTTTCCTCATCTGAA     50

BSNT_04103___     51 AGACCGCCTTGTGGAAAAGGGGATGTCATCACTAAAGGAAAAAAAGTATC    100
                     ||||||||||||||||||.||||||||||||||.||||||||||||||||
BSU28240___ys     51 AGACCGCCTTGTGGAAAAAGGGATGTCATCACTCAAGGAAAAAAAGTATC    100

BSNT_04103___    101 AAGAAGCGCTTGAACTGTTTTCAGAAGCGATGAAATATGATGATACTGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    101 AAGAAGCGCTTGAACTGTTTTCAGAAGCGATGAAATATGATGATACTGAA    150

BSNT_04103___    151 TCCGATCTTCACTTAGGGATGGCCATCTGCTTTTTAGAGCTGGGCGAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    151 TCCGATCTTCACTTAGGGATGGCCATCTGCTTTTTAGAGCTGGGCGAGCT    200

BSNT_04103___    201 GGAAGAGGCAAAAAGCGTGTGCGAGAAGATGCTCAAAGAAGGTTATGGCC    250
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU28240___ys    201 GGAAGAGGCAGAAAGCGTGTGCGAGAAGATGCTCAAAGAAGGTTATGGCC    250

BSNT_04103___    251 ATTATTTTACGGTTTTGCAGGTGTACATGACCATCTTAATTCAGCTCAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    251 ATTATTTTACGGTTTTGCAGGTGTACATGACCATCTTAATTCAGCTCAAA    300

BSNT_04103___    301 AAATACGAGGAAGTCAAAAGCACCATTGAAGCCGTTTTGGAAGAAAATCA    350
                     ||.|||||.|||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    301 AAGTACGAAGAAGTCAAAAGCACCATTGAAGCCGTTTTGGAAGAAAATCA    350

BSNT_04103___    351 GCTGCCGGCAGAAAGCGCCGAGCAATTTTATAAGCTGCTGGATTTCAGCC    400
                     |||||||||||||||.||||||||||||||||||||||||||||||||||
BSU28240___ys    351 GCTGCCGGCAGAAAGTGCCGAGCAATTTTATAAGCTGCTGGATTTCAGCC    400

BSNT_04103___    401 GGAAAATGACCGATCCGGATCGTGAGGACGAGGCTTGGGCCGAAGAATAT    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    401 GGAAAATGACCGATCCGGATCGTGAGGACGAGGCTTGGGCCGAAGAATAT    450

BSNT_04103___    451 GAGGATACAATTGACACCGAGAAAGTGCTGGCAAGCCCTGAGGAGCAAAT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    451 GAGGATACAATTGACACCGAGAAAGTGCTGGCAAGCCCTGAGGAGCAAAT    500

BSNT_04103___    501 GAATCTCATTCATTCCTTAAAAGACCGTAACGTAGCAAAGTATACAGGAT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    501 GAATCTCATTCATTCCTTAAAAGACCGTAACGTAGCAAAGTATACAGGAT    550

BSNT_04103___    551 TGCTCAAAACAATCCTCCAAGACCCCTCAGCCCACCCGATTATCAAAACG    600
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU28240___ys    551 TGCTCAAAACAATCCTCCAAGACCCCTCAGCCCATCCGATTATCAAAACG    600

BSNT_04103___    601 ATGATTGTCATGCTGTTGACTGAGCATGAGTACAGTAAGCCTGTACACAT    650
                     ||||||||||||||||||.|||||||||||||||||||.|||||||||||
BSU28240___ys    601 ATGATTGTCATGCTGTTGGCTGAGCATGAGTACAGTAAACCTGTACACAT    650

BSNT_04103___    651 TAGTAAATTTGGCGAGTCGTTGACAATTGAACCGTCTGAGATTGTTCCGC    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU28240___ys    651 TAGTAAATTTGGCGAGTCGTTGACAATTGAACCGTCAGAGATTGTTCCGC    700

BSNT_04103___    701 CTGATGCCGCGCCGATTCTGCACCGTGTTCTCAGGGTGCTGGATGAGACA    750
                     |||||||||||||||||||.||||||||||||||||||||.|||||||||
BSU28240___ys    701 CTGATGCCGCGCCGATTCTTCACCGTGTTCTCAGGGTGCTAGATGAGACA    750

BSNT_04103___    751 CTTGGAAATGAAAATCCAACCTTATATGCAGCAGTAGAGGAATTGTGGAG    800
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU28240___ys    751 CTTGGAAATGAAAATCCAACCTTATATGCAGCAGTAGAAGAATTGTGGAG    800

BSNT_04103___    801 AAGACATTTGTACGTTTTATATCCGTTCCAGCCGAAATTGCTGTCGGCTG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    801 AAGACATTTGTACGTTTTATATCCGTTCCAGCCGAAATTGCTGTCGGCTG    850

BSNT_04103___    851 ACCTTTGGGCGGCTGCCCTTCATAAAGTCGGTTACGAGATGCACGGGATT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    851 ACCTTTGGGCGGCTGCCCTTCATAAAGTCGGTTACGAGATGCACGGGATT    900

BSNT_04103___    901 GAAATTGAAAGCGAAGAACTTCATATGATGTATGAATTTACCGACAGAGA    950
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28240___ys    901 GAAATTGAAAGCGAAGAACTTCATATGATGTATGAATTTACAGACAGAGA    950

BSNT_04103___    951 ACTCGATGAAGCTTGCACAATGTTAAAAGATATTGAAGAAATTTCTTATT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28240___ys    951 ACTCGATGAAGCTTGCACAATGTTAAAAGATATTGAAGAAATTTCTTATT   1000

BSNT_04103___   1001 TGTAA   1005
                     |||||
BSU28240___ys   1001 TGTAA   1005


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04103 and BSU28240

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
