Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04098 and BSU28200
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########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_04098___lonA.1.22522.seq
# -bsequence dna-align/BSU28200___lonA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04098___lonA-BSU28200___lonA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04098___lonA-BSU28200___lonA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04098___lonA
# 2: BSU28200___lonA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2325
# Identity: 2294/2325 (98.7%)
# Similarity: 2294/2325 (98.7%)
# Gaps: 0/2325 ( 0.0%)
# Score: 11346.0
#
#
#=======================================
BSNT_04098___ 1 ATGGCAGAAGAATTAAAACGCAGCATCCCGCTCCTCCCTTTAAGAGGTTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1 ATGGCAGAAGAATTAAAACGCAGCATCCCGCTCCTCCCTTTAAGAGGTTT 50
BSNT_04098___ 51 ATTAGTGTACCCGACGATGGTTTTGCATTTAGATGTAGGACGTGACAAGT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 51 ATTAGTGTACCCGACGATGGTTTTGCATTTAGATGTAGGACGTGACAAGT 100
BSNT_04098___ 101 CGGTTCAGGCTCTTGAACAGGCAATGATGCATGATCATATGATATTTTTA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 101 CGGTTCAGGCTCTTGAACAGGCAATGATGCATGATCATATGATATTTTTA 150
BSNT_04098___ 151 GCCACTCAGCAGGATATTTCGATAGACGAACCTGGTGAAGACGAGATTTT 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 151 GCCACTCAGCAGGATATTTCGATAGACGAACCTGGTGAAGACGAGATTTT 200
BSNT_04098___ 201 CACTGTCGGCACCTATACAAAAATTAAGCAAATGCTGAAGCTTCCGAACG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 201 CACTGTCGGCACCTATACAAAAATTAAGCAAATGCTGAAGCTTCCGAACG 250
BSNT_04098___ 251 GTACGATTCGTGTGTTGGTGGAGGGCCTCAAACGCGCCCAGATCGTCAAA 300
|||||||||||||||||||||||||||||||.||||||||.|||||||||
BSU28200___lo 251 GTACGATTCGTGTGTTGGTGGAGGGCCTCAAGCGCGCCCATATCGTCAAA 300
BSNT_04098___ 301 TACAATGAACACGAGGATTACACGTCGGTCGACATTCAACTTATTCATGA 350
|||||||||||||||||||||||||||||.||||||||||||||||||||
BSU28200___lo 301 TACAATGAACACGAGGATTACACGTCGGTTGACATTCAACTTATTCATGA 350
BSNT_04098___ 351 AGATGATTCAAAAGATACAGAAGACGAAGCATTGATGCGGACTTTGCTAG 400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 351 AGATGATTCAAAAGATACAGAAGACGAAGCATTGATGCGGACTTTGCTAG 400
BSNT_04098___ 401 ACCACTTTGATCAGTACATAAAAATTTCTAAAAAAATCTCGGCCGAAACG 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 401 ACCACTTTGATCAGTACATAAAAATTTCTAAAAAAATCTCGGCCGAAACG 450
BSNT_04098___ 451 TACGCCGCGGTTACTGATATCGAAGAGCCGGGGAGAATGGCAGACATCGT 500
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 451 TACGCTGCGGTTACTGATATCGAAGAGCCGGGGAGAATGGCAGACATCGT 500
BSNT_04098___ 501 TGCTTCTCATCTGCCCCTTAAACTAAAGGATAAGCAGGATATTTTAGAAA 550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 501 TGCTTCTCATCTGCCCCTTAAACTAAAGGATAAGCAGGATATTTTAGAAA 550
BSNT_04098___ 551 CGGCTGATGTCAAAGACAGGCTGAACAAGGTCATTGATTTTATTAATAAT 600
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 551 CGGCTGATGTCAAAGACAGGCTGAACAAGGTCATTGATTTTATTAATAAT 600
BSNT_04098___ 601 GAAAAAGAAGTGCTGGAGATTGAGAAAAAAATCGGCCAGCGCGTCAAACG 650
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 601 GAAAAAGAAGTGCTGGAGATTGAGAAAAAAATCGGCCAGCGCGTCAAACG 650
BSNT_04098___ 651 TTCGATGGAGCGTACGCAGAAGGAATACTACTTGCGAGAACAAATGAAGG 700
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU28200___lo 651 TTCGATGGAGCGTACGCAGAAGGAATACTACTTGCGTGAACAAATGAAGG 700
BSNT_04098___ 701 CGATTCAAAAAGAGCTTGGCGATAAAGAAGGCAAAACTGGCGAAGTTCAG 750
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 701 CGATCCAAAAAGAGCTTGGCGATAAAGAAGGCAAAACTGGCGAAGTTCAG 750
BSNT_04098___ 751 ACGCTGACGGAAAAAATCGAAGAAGCAGGCATGCCTGATCATGTGAAGGA 800
|||||||||||||||||||||||||||||||||||||||||||||||.||
BSU28200___lo 751 ACGCTGACGGAAAAAATCGAAGAAGCAGGCATGCCTGATCATGTGAAAGA 800
BSNT_04098___ 801 AACAGCGCTTAAAGAATTGAACAGATATGAAAAAATTCCGTCAAGTTCTG 850
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 801 AACAGCGCTTAAAGAATTGAACAGATATGAAAAAATTCCGTCAAGTTCTG 850
BSNT_04098___ 851 CGGAAAGCTCCGTGATCCGCAACTATATCGACTGGCTGGTTGCTCTTCCG 900
||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU28200___lo 851 CGGAAAGCTCTGTGATCCGCAACTATATCGACTGGCTGGTTGCTCTTCCG 900
BSNT_04098___ 901 TGGACGGATGAAACAGATGATAAGCTTGATTTGAAAGAAGCAGGACGTCT 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 901 TGGACGGATGAAACAGATGATAAGCTTGATTTGAAAGAAGCAGGACGTCT 950
BSNT_04098___ 951 CTTGGACGAAGAGCACCACGGGCTAGAAAAAGTAAAAGAACGTATTTTAG 1000
||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU28200___lo 951 CTTGGACGAAGAGCACCACGGGCTTGAAAAAGTAAAAGAACGTATTTTAG 1000
BSNT_04098___ 1001 AATATTTGGCTGTCCAGAAGCTGACCAAATCCCTGAAAGGCCCGATTCTC 1050
|||||||||||||||||||||||||.||||||||||||||||||||||||
BSU28200___lo 1001 AATATTTGGCTGTCCAGAAGCTGACAAAATCCCTGAAAGGCCCGATTCTC 1050
BSNT_04098___ 1051 TGTTTGGCAGGACCTCCAGGTGTCGGAAAAACGTCTTTAGCCAAATCAAT 1100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1051 TGTTTGGCAGGACCTCCAGGTGTCGGAAAAACGTCTTTAGCCAAATCAAT 1100
BSNT_04098___ 1101 TGCAAAAAGCTTGGGACGCAAATTCGTCAGAATCTCACTCGGAGGAGTAC 1150
||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU28200___lo 1101 TGCAAAAAGCTTGGGACGCAAATTCGTCAGAATCTCACTCGGAGGAGTTC 1150
BSNT_04098___ 1151 GGGACGAATCAGAGATACGCGGACACAGACGGACCTATGTCGGAGCAATG 1200
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1151 GGGATGAATCAGAGATACGCGGACACAGACGGACCTATGTCGGAGCAATG 1200
BSNT_04098___ 1201 CCTGGACGTATTATTCAAGGGATGAAAAAAGCGGGCAAGCTGAATCCGGT 1250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1201 CCTGGACGTATTATTCAAGGGATGAAAAAAGCGGGCAAGCTGAATCCGGT 1250
BSNT_04098___ 1251 CTTCTTATTAGACGAAATTGACAAAATGTCATCTGATTTTAGAGGAGACC 1300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1251 CTTCTTATTAGACGAAATTGACAAAATGTCATCTGATTTTAGAGGAGACC 1300
BSNT_04098___ 1301 CATCATCCGCTATGCTTGAAGTGCTTGATCCAGAGCAAAACAGCAGCTTC 1350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1301 CATCATCCGCTATGCTTGAAGTGCTTGATCCAGAGCAAAACAGCAGCTTC 1350
BSNT_04098___ 1351 AGTGATCACTATATTGAAGAAACCTTTGATTTATCCAAAGTGCTGTTTAT 1400
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1351 AGTGATCACTATATTGAAGAAACCTTTGATTTATCCAAAGTGCTGTTTAT 1400
BSNT_04098___ 1401 CGCAACGGCAAACAATTTGGCCACAATCCCGGGCCCGCTCAGAGACAGAA 1450
|||||||||.||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1401 CGCAACGGCGAACAATTTGGCCACAATCCCGGGCCCGCTCAGAGACAGAA 1450
BSNT_04098___ 1451 TGGAAATTATTAATATCGCAGGCTACACAGAAATAGAAAAACTTGAAATC 1500
|||||||||||||||||||||||||||||||||||||||||||||||||.
BSU28200___lo 1451 TGGAAATTATTAATATCGCAGGCTACACAGAAATAGAAAAACTTGAAATT 1500
BSNT_04098___ 1501 GTAAAGGATCACTTGCTTCCAAAGCAAATCAAAGAACACGGGCTGAAGAA 1550
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1501 GTAAAGGATCACTTGCTTCCAAAGCAAATCAAAGAACACGGGCTGAAGAA 1550
BSNT_04098___ 1551 AAGCAACCTGCAGCTGCGTGATCAGGCGATTCTTGATATTATCCGCTACT 1600
||||||.||.||||||||||||||||||||||||||||||||.||.||||
BSU28200___lo 1551 AAGCAATCTTCAGCTGCGTGATCAGGCGATTCTTGATATTATTCGTTACT 1600
BSNT_04098___ 1601 ATACGAGAGAAGCTGGTGTGAGAAGCCTTGAACGCCAGCTTGCCGCGATT 1650
|||||||||||||.|||||.||||||||||||||||||||||||||.|||
BSU28200___lo 1601 ATACGAGAGAAGCGGGTGTAAGAAGCCTTGAACGCCAGCTTGCCGCAATT 1650
BSNT_04098___ 1651 TGCCGTAAAGCTGCAAAAGCCATTGTTGCTGAAGAGCGAAAACGGATTAC 1700
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU28200___lo 1651 TGCCGTAAAGCTGCAAAAGCCATTGTTGCTGAAGAGCGAAAACGAATTAC 1700
BSNT_04098___ 1701 GGTTACTGAGAAGAACCTTCAAGACTTTATCGGAAAACGTATTTTCAGAT 1750
||||||||||||||||||||||||.||||||||||||||.||||||||||
BSU28200___lo 1701 GGTTACTGAGAAGAACCTTCAAGATTTTATCGGAAAACGCATTTTCAGAT 1750
BSNT_04098___ 1751 ATGGACAAGCTGAAACAGAGGATCAGGTTGGTGTAGTGACAGGGCTTGCT 1800
|||||||||||||||||||||||||.|||||||||||||||||||||||.
BSU28200___lo 1751 ATGGACAAGCTGAAACAGAGGATCAAGTTGGTGTAGTGACAGGGCTTGCG 1800
BSNT_04098___ 1801 TATACAACCGTTGGCGGAGATACGCTGTCGATTGAAGTATCGCTTTCTCC 1850
||||||||||||||||||||||||||.||||||||||||||||||||.||
BSU28200___lo 1801 TATACAACCGTTGGCGGAGATACGCTTTCGATTGAAGTATCGCTTTCACC 1850
BSNT_04098___ 1851 GGGGAAAGGGAAATTAATCCTGACAGGAAAGCTCGGAGATGTTATGAGAG 1900
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1851 GGGAAAAGGGAAATTAATCCTGACAGGAAAGCTCGGAGATGTTATGAGAG 1900
BSNT_04098___ 1901 AGTCAGCTCAGGCTGCATTCAGCTATGTGCGATCCAAAACAGAAGAACTT 1950
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1901 AGTCTGCTCAGGCTGCATTCAGCTATGTGCGATCCAAAACAGAAGAACTT 1950
BSNT_04098___ 1951 GGCATTGAACCTGACTTTCATGAGAAGTATGATATTCATATACATGTACC 2000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 1951 GGCATTGAACCTGACTTTCATGAGAAGTATGATATTCATATACATGTACC 2000
BSNT_04098___ 2001 AGAGGGTGCGGTGCCAAAAGATGGTCCGTCAGCTGGTATTACGATGGCAA 2050
|||||||||||||||||||||||||||||||||.||||||||||||||||
BSU28200___lo 2001 AGAGGGTGCGGTGCCAAAAGATGGTCCGTCAGCCGGTATTACGATGGCAA 2050
BSNT_04098___ 2051 CAGCGCTTGTTTCTGCTTTAACGGGACGGGCGGTTTCGCGTGAAGTCGGC 2100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 2051 CAGCGCTTGTTTCTGCTTTAACGGGACGGGCGGTTTCGCGTGAAGTCGGC 2100
BSNT_04098___ 2101 ATGACTGGGGAAATCACGCTTCGCGGGCGCGTGCTGCCGATCGGCGGCTT 2150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 2101 ATGACTGGGGAAATCACGCTTCGCGGGCGCGTGCTGCCGATCGGCGGCTT 2150
BSNT_04098___ 2151 AAAGGAAAAAGCGCTTGGCGCACATAGAGCGGGATTAACGACCATTATTG 2200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 2151 AAAGGAAAAAGCGCTTGGCGCACATAGAGCGGGATTAACGACCATTATTG 2200
BSNT_04098___ 2201 CGCCTAAAGATAATGAAAAAGATATAGAGGATATTCCGGAAAGCGTCAGG 2250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 2201 CGCCTAAAGATAATGAAAAAGATATAGAGGATATTCCGGAAAGCGTCAGG 2250
BSNT_04098___ 2251 GAGGGGCTGACATTTATATTGGCGTCCCACTTAGACGAGGTTTTGGAACA 2300
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28200___lo 2251 GAGGGGCTGACATTTATATTGGCGTCCCACTTAGACGAGGTTTTGGAACA 2300
BSNT_04098___ 2301 TGCCTTAGTAGGAGAGAAGAAATGA 2325
|||||||||||||||||||||||||
BSU28200___lo 2301 TGCCTTAGTAGGAGAGAAGAAATGA 2325
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Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.