Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_04089 and BSU28140

See Amino acid alignment / Visit BSNT_04089 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:26
# Commandline: needle
#    -asequence dna-align/BSNT_04089___hemD.1.22522.seq
#    -bsequence dna-align/BSU28140___hemD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04089___hemD-BSU28140___hemD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04089___hemD-BSU28140___hemD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04089___hemD
# 2: BSU28140___hemD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 789
# Identity:     774/789 (98.1%)
# Similarity:   774/789 (98.1%)
# Gaps:           0/789 ( 0.0%)
# Score: 3810.0
# 
#
#=======================================

BSNT_04089___      1 ATGGAAAATGATTTTCCGTTGAAAGGAAAAACAGTACTTGTCACCCGGAA     50
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU28140___he      1 ATGGAAAATGATTTTCCGTTGAAAGGAAAAACAGTGCTTGTCACCCGGAA     50

BSNT_04089___     51 TAAGGCACAGGCAACATCATTTCAGCAAAAAGTGGAGGCGCTTGGCGGTA    100
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU28140___he     51 TAAGGCACAGGCAGCATCATTTCAGCAAAAAGTGGAGGCGCTTGGCGGTA    100

BSNT_04089___    101 AAGCGGTTTTAACCTCTTTGATTACGTTTCGCCGCGCTTTGCCGAATGAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28140___he    101 AAGCGGTTTTAACCTCTTTGATTACGTTTCGCCGCGCTTTGCCGAATGAT    150

BSNT_04089___    151 GTTGCGGAACAGGTAAGAGAGGACCTTGCCGCGCCAGGCTGGCTTGTTTT    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU28140___he    151 GTTGCGGAACAGGTAAGAGAGGATCTTGCCGCGCCAGGCTGGCTTGTTTT    200

BSNT_04089___    201 TACAAGTGTGAACGGGGCAGACTTCTTTTTTTCTTATCTGAAGGAAAATC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28140___he    201 TACAAGTGTGAACGGGGCAGACTTCTTTTTTTCTTATCTGAAGGAAAATC    250

BSNT_04089___    251 AGCTTATTCTCCCTGCGCATAAAAAAATTGCAGCAGTCGGTGAAAAAACC    300
                     ||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU28140___he    251 AGCTTATTCTCCCTGCGCATAAAAAAATTGCAGCCGTCGGTGAAAAAACC    300

BSNT_04089___    301 GCCCGCCGTTTACAAACGCATAACGTATCGGTTGATGTGATGCCACAGGA    350
                     ||.|||||||||.|||.|||||||||||||||||||||||||||||||||
BSU28140___he    301 GCGCGCCGTTTAAAAATGCATAACGTATCGGTTGATGTGATGCCACAGGA    350

BSNT_04089___    351 GTATATTGCTGAACAATTGGCTGACGCTCTTAAGCAGCATGCTGAACCGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28140___he    351 GTATATTGCTGAACAATTGGCTGACGCTCTTAAGCAGCATGCTGAACCGG    400

BSNT_04089___    401 GGGAGCCCATTACCGTAATGAAAGGGAATTTGTCACGTGATGTGATAAAA    450
                     |||||.||||||||||.|||||||||||||||||||||||||||||||||
BSU28140___he    401 GGGAGACCATTACCGTGATGAAAGGGAATTTGTCACGTGATGTGATAAAA    450

BSNT_04089___    451 CAAGAGCTTGTCCCGCTCGGTTTTGAAGTTAAGGAATGGGTTCTCTACGA    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU28140___he    451 CAAGAGCTTGTCCCGCTCGGTTTTGAAGTAAAGGAATGGGTTCTCTACGA    500

BSNT_04089___    501 AACGATTCCAGATGAAGAAGGCATCGAGGCACTGAAAGACGCTGCGGGTC    550
                     |||||||||.||||||||||||||.||||||.||||||||||||||||||
BSU28140___he    501 AACGATTCCGGATGAAGAAGGCATTGAGGCATTGAAAGACGCTGCGGGTC    550

BSNT_04089___    551 AATATTCCTTTGACTATGTAACATTTACGAGTTCATCAACCGTACATACG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28140___he    551 AATATTCCTTTGACTATGTAACATTTACGAGTTCATCAACCGTACATACG    600

BSNT_04089___    601 TTTATGCATGTCTTGGGAGAAGAATTAAAAAAGTGGAAGGCGAATGGGAC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28140___he    601 TTTATGCATGTCTTGGGAGAAGAATTAAAAAAGTGGAAGGCGAATGGGAC    650

BSNT_04089___    651 GGCTTGTATCAGCATTGGGCCTTTAACAAATGATGCCCTTCTGACGTACG    700
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU28140___he    651 GGCCTGTATCAGCATTGGGCCTTTAACAAATGATGCCCTTCTGACGTACG    700

BSNT_04089___    701 GCATCACATCGCATACGCCTGATACATTTACAATAGATGGCATGCTTGGG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU28140___he    701 GCATCACATCGCATACGCCTGATACATTTACAATAGATGGCATGCTTGAG    750

BSNT_04089___    751 TTAATGTGCAGCATGTCAAGAGAGGAAGAGAGAATATGA    789
                     |||||||||||||||||||||||||||||||||||||||
BSU28140___he    751 TTAATGTGCAGCATGTCAAGAGAGGAAGAGAGAATATGA    789


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.