Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04068 and BSU28020

See Amino acid alignment / Visit BSNT_04068 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:23
# Commandline: needle
#    -asequence dna-align/BSNT_04068___mreC.1.22522.seq
#    -bsequence dna-align/BSU28020___mreC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04068___mreC-BSU28020___mreC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04068___mreC-BSU28020___mreC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04068___mreC
# 2: BSU28020___mreC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 873
# Identity:     868/873 (99.4%)
# Similarity:   868/873 (99.4%)
# Gaps:           0/873 ( 0.0%)
# Score: 4320.0
# 
#
#=======================================

BSNT_04068___      1 ATGCCGAATAAGCGGTTAATGCTATTACTTCTGTGTATTATCATATTGGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr      1 ATGCCGAATAAGCGGTTAATGCTATTACTTCTGTGTATTATCATATTGGT     50

BSNT_04068___     51 GGCTATGATTGGATTTTCGCTGAAGGGCGGCCGCAATACCACCTGGCCTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr     51 GGCTATGATTGGATTTTCGCTGAAGGGCGGCCGCAATACCACCTGGCCTG    100

BSNT_04068___    101 AGAAAGTGATCGGCGATACGACGGGAGTATTTCAAAATATTTTTCATACG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    101 AGAAAGTGATCGGCGATACGACGGGAGTATTTCAAAATATTTTTCATACG    150

BSNT_04068___    151 CCTGCCGAATTTTTTGCAGGAATATTTGAGAACATCAATGATTTAAAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    151 CCTGCCGAATTTTTTGCAGGAATATTTGAGAACATCAATGATTTAAAAAA    200

BSNT_04068___    201 CACATACAAAGAAAACGAGCGTCTAAGAGAAAAACTTGACGGACAGACAC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    201 CACATACAAAGAAAACGAGCGTCTAAGAGAAAAACTTGACGGACAGACAC    250

BSNT_04068___    251 AATATGAAGCCAAGCTTCAAGAGCTTGAAGAAGAAAACAAATCCTTGCGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    251 AATATGAAGCCAAGCTTCAAGAGCTTGAAGAAGAAAACAAATCCTTGCGT    300

BSNT_04068___    301 GACGAGCTTGGCCATGTCAAATCGATTAAAGATTACAAGCCGATTTTAGC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    301 GACGAGCTTGGCCATGTCAAATCGATTAAAGATTACAAGCCGATTTTAGC    350

BSNT_04068___    351 AACGGTCATCGCCAGAAGCCCTGATAATTGGGCCAAACAGGTCACCATTA    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU28020___mr    351 AACGGTCATCGCCAGAAGCCCTGATAATTGGGCGAAACAGGTCACCATTA    400

BSNT_04068___    401 ACAAGGGGACTCAGCAAAACGTAGCGAAAGATATGGCCGTTACAAACGAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    401 ACAAGGGGACTCAGCAAAACGTAGCGAAAGATATGGCCGTTACAAACGAA    450

BSNT_04068___    451 AAAGGCGCATTAATCGGCAAGATCAAAAGCTCCGGACTTAACAATTTTAC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    451 AAAGGCGCATTAATCGGCAAGATCAAAAGCTCCGGACTTAACAATTTTAC    500

BSNT_04068___    501 GTCTACTGTTCAGCTTTTAAGCGATACTGACCGCAATAACAGAGTCGCGA    550
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    501 GTCTGCTGTTCAGCTTTTAAGCGATACTGACCGCAATAACAGAGTCGCGA    550

BSNT_04068___    551 CAAAAATTTCCGGAAAAAAAGGCAGCAAAGGCTACGGCTTGATCGAAGGA    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    551 CAAAAATTTCCGGAAAAAAAGGCAGCAAAGGCTACGGCTTGATCGAAGGA    600

BSNT_04068___    601 TATGACAAAGAGAAAAAACGTCTTAAGATGACAATTATTGAGCGTAAGGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    601 TATGACAAAGAGAAAAAACGTCTTAAGATGACAATTATTGAGCGTAAGGA    650

BSNT_04068___    651 TAAACAAGACGTGAAAAAAGGCGATCTTATTGAAACATCAGGGACAGGCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    651 TAAACAAGACGTGAAAAAAGGCGATCTTATTGAAACATCAGGGACAGGCG    700

BSNT_04068___    701 GTGTTTTCCCAGAAGGGCTGACAATCGGTGAAGTGACTGATATCGAGTCA    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    701 GTGTTTTCCCAGAAGGGCTGACAATCGGTGAAGTGACTGATATCGAGTCA    750

BSNT_04068___    751 GATTCCTATGGACTGACGAAGGTTGCTTATGTAAAACCCGCGGCTGACCT    800
                     ||||||||||||.|.|||||||||||||||||||||||.|||||||||||
BSU28020___mr    751 GATTCCTATGGATTAACGAAGGTTGCTTATGTAAAACCTGCGGCTGACCT    800

BSNT_04068___    801 TACAGATTTAAATAATGTGATCGTTGTTAACCGTGACGTGCCGACTGTCG    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28020___mr    801 TACAGATTTAAATAATGTGATCGTTGTTAACCGTGACGTGCCGACTGTCG    850

BSNT_04068___    851 ATACAGAGGAGGAAGGATCGTGA    873
                     |||||||||||||||||||||||
BSU28020___mr    851 ATACAGAGGAGGAAGGATCGTGA    873


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04068 and BSU28020

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
