Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04065 and BSU28010

See Amino acid alignment / Visit BSNT_04065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_04065___mreD.1.22522.seq
#    -bsequence dna-align/BSU28010___mreD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04065___mreD-BSU28010___mreD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04065___mreD-BSU28010___mreD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04065___mreD
# 2: BSU28010___mreD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 519
# Identity:     517/519 (99.6%)
# Similarity:   517/519 (99.6%)
# Gaps:           0/519 ( 0.0%)
# Score: 2577.0
# 
#
#=======================================

BSNT_04065___      1 GTGAAACGTTTCCTTCTCCCTTTCGTTATGATGCTTGTTTTTTCTGCGGA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr      1 GTGAAACGTTTCCTTCTCCCTTTCGTTATGATGCTTGTTTTTTCTGCGGA     50

BSNT_04065___     51 AAGCATTTTTACAGATTTGGTGCATTTTCCTTTCGTTACAGATGACCAAG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr     51 AAGCATTTTTACAGATTTGGTGCATTTTCCTTTCGTTACAGATGACCAAG    100

BSNT_04065___    101 TGCTCGCCCCGCGTTTTTTGATGCTTGTATTGATATTCATGTCGGCTTTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr    101 TGCTCGCCCCGCGTTTTTTGATGCTTGTATTGATATTCATGTCGGCTTTT    150

BSNT_04065___    151 ATCAACCAAAAACACGCGATGATTTACGGATTTATTTTTGGTTTTCTATA    200
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU28010___mr    151 ATCAACCAAAAACACGCGATGATTTACGGATTTATTTTTGGCTTTCTATA    200

BSNT_04065___    201 TGACATGAACTATACAAGTCTATTAGGCGTTTACATGTTTGGTTTTGCAG    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr    201 TGACATGAACTATACAAGTCTATTAGGCGTTTACATGTTTGGTTTTGCAG    250

BSNT_04065___    251 GGCTATGCTATTTGGCTTCAAAAGCGTTTAAAGTGTTACATACAAACGCA    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU28010___mr    251 GGCTATGCTATTTGGCTTCAAAAGCGTTTAAAGTGTTGCATACAAACGCA    300

BSNT_04065___    301 TTTGTAGTGATATTGATAGCAGTTCTGGCTGTCTGTCTGCTCGAATTTTA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr    301 TTTGTAGTGATATTGATAGCAGTTCTGGCTGTCTGTCTGCTCGAATTTTA    350

BSNT_04065___    351 CGTATTCGGCATTCAGTCTTTGATTCATAAAGACATTATGACGTTTAACG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr    351 CGTATTCGGCATTCAGTCTTTGATTCATAAAGACATTATGACGTTTAACG    400

BSNT_04065___    401 GATTTGTGCTTGACCGGTTTATACCGACAATTTTATTAAATATTGCAGCA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr    401 GATTTGTGCTTGACCGGTTTATACCGACAATTTTATTAAATATTGCAGCA    450

BSNT_04065___    451 GCTCTTATTCTTGTTCTGCCATTTAGATTGTTTTTTATGAGTCTAAAGAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU28010___mr    451 GCTCTTATTCTTGTTCTGCCATTTAGATTGTTTTTTATGAGTCTAAAGAA    500

BSNT_04065___    501 AGAATTGAGAGATGAGTAA    519
                     |||||||||||||||||||
BSU28010___mr    501 AGAATTGAGAGATGAGTAA    519


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