Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_04061 and BSU27970

See Amino acid alignment / Visit BSNT_04061 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_04061___spoIVFB.1.22522.seq
#    -bsequence dna-align/BSU27970___spoIVFB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04061___spoIVFB-BSU27970___spoIVFB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04061___spoIVFB-BSU27970___spoIVFB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04061___spoIVFB
# 2: BSU27970___spoIVFB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 867
# Identity:     860/867 (99.2%)
# Similarity:   860/867 (99.2%)
# Gaps:           0/867 ( 0.0%)
# Score: 4272.0
# 
#
#=======================================

BSNT_04061___      1 TTGAATAAATGGCTCGACCTTATCTTAAAGATCCATGTGCATCCTTTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp      1 TTGAATAAATGGCTCGACCTTATCTTAAAGATCCATGTGCATCCTTTTCT     50

BSNT_04061___     51 TTGGATTATCGCGGCGCTGGGCTTGCTCACAGGCCATATGAAAGCATTAT    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU27970___sp     51 TTGGATTATTGCGGCGCTGGGCTTGCTCACAGGCCATATGAAAGCATTAT    100

BSNT_04061___    101 TTTGTCTGCTCCTGATTGTATTGATTCATGAGCTGGGGCATGCTGCTCTG    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    101 TATGTCTGCTCCTGATTGTATTGATTCATGAGCTGGGGCATGCTGCTCTG    150

BSNT_04061___    151 GCTGTGTTTTTTTCTTGGAGAATCAAGCGTGTTTTTTTGCTGCCGTTTGG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    151 GCTGTGTTTTTTTCTTGGAGAATCAAGCGTGTTTTTTTGCTGCCGTTTGG    200

BSNT_04061___    201 GGGAACGGTCGAAGTGGAAGAGCACGGGAATCGGCCGTTAAAGGAAGAGT    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    201 CGGAACGGTCGAAGTGGAAGAGCACGGGAATCGGCCGTTAAAGGAAGAGT    250

BSNT_04061___    251 TTGCGGTCATTATTGCCGGCCCTCTTCAGCACATCTGGCTTCAGTTTGCC    300
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU27970___sp    251 TTGCGGTCATTATTGCCGGACCTCTTCAGCACATCTGGCTTCAGTTTGCC    300

BSNT_04061___    301 GCCTGGATGCTTGCAGAAGTCTCAGTGATTCATCAGCATACCTTTGAACT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    301 GCCTGGATGCTTGCAGAAGTCTCAGTGATTCATCAGCATACCTTTGAACT    350

BSNT_04061___    351 CTTCACCTTTTATAATCTTTCTATCTTATTTGTCAATTTACTGCCGATCT    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    351 CTTCACCTTTTATAATCTTTCTATCTTATTTGTCAATTTACTGCCGATCT    400

BSNT_04061___    401 GGCCGCTGGATGGAGGAAAACTGTTATTTTTGTTGTTTTCCAAACAGCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    401 GGCCGCTGGATGGAGGAAAACTGTTATTTTTGTTGTTTTCCAAACAGCTG    450

BSNT_04061___    451 CCTTTTCAAAAGGCTCACCGGCTTAATCTAAAAACGTCGCTCTGCTTCTG    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    451 CCTTTTCAAAAGGCTCACCGGCTTAATCTAAAAACGTCGCTCTGCTTCTG    500

BSNT_04061___    501 CCTGTTGCTCGGGTGCTGGGTTTTATTCGTGATTCCTCTGCAGATCAGCG    550
                     ||||.|||||||||||||||||||||||||||||||||||||.|||||||
BSU27970___sp    501 CCTGCTGCTCGGGTGCTGGGTTTTATTCGTGATTCCTCTGCAAATCAGCG    550

BSNT_04061___    551 CATGGGTTTTGTTTGTCTTTCTGGCTGTTTCCTTGTTTGAGGAATATCGG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    551 CATGGGTTTTGTTTGTCTTTCTGGCTGTTTCCTTGTTTGAGGAATATCGG    600

BSNT_04061___    601 CAAAGGCACTATATCCATGTGAGATTTCTCCTCGAAAGGTATTACGGAAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    601 CAAAGGCACTATATCCATGTGAGATTTCTCCTCGAAAGGTATTACGGAAA    650

BSNT_04061___    651 AAACAGGGAGCTTGAGAAACTTCTGCCGCTGACAGTAAAGGCGGAGGATA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    651 AAACAGGGAGCTTGAGAAACTTCTGCCGCTGACAGTAAAGGCGGAGGATA    700

BSNT_04061___    701 AAGTCTATCATGTGATGGCCGAGTTCAAACGTGGCTGTAAGCATCCGATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    701 AAGTCTATCATGTGATGGCCGAGTTCAAACGTGGCTGTAAGCATCCGATT    750

BSNT_04061___    751 ATTATAGAAAAATCAGGCCAAAAGCTCAGCCAGCTTGACGAGAATGAAGT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27970___sp    751 ATTATAGAAAAATCAGGCCAAAAGCTCAGCCAGCTTGACGAGAATGAAGT    800

BSNT_04061___    801 GCTGCACGCTTACTTTGCCGATAAGCGGACGAATTCTTCCATGGAGGAGC    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU27970___sp    801 GCTGCACGCTTACTTTGCCGATAAGCGGACGAATTCTTCCATGGAGGAAC    850

BSNT_04061___    851 TGCTTCTGCCCTACTAA    867
                     |||||||||||||||||
BSU27970___sp    851 TGCTTCTGCCCTACTAA    867


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_04061 and BSU27970

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
