Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04060 and BSU27960

See Amino acid alignment / Visit BSNT_04060 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_04060___rplU.1.22522.seq
#    -bsequence dna-align/BSU27960___rplU.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04060___rplU-BSU27960___rplU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04060___rplU-BSU27960___rplU.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04060___rplU
# 2: BSU27960___rplU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 309
# Identity:     309/309 (100.0%)
# Similarity:   309/309 (100.0%)
# Gaps:           0/309 ( 0.0%)
# Score: 1545.0
# 
#
#=======================================

BSNT_04060___      1 ATGTACGCAATCATTAAAACAGGCGGTAAACAAATCAAAGTTGAAGAAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27960___rp      1 ATGTACGCAATCATTAAAACAGGCGGTAAACAAATCAAAGTTGAAGAAGG     50

BSNT_04060___     51 CCAAACTGTTTACATCGAAAAACTTGCTGCTGAAGCAGGTGAAACAGTTA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27960___rp     51 CCAAACTGTTTACATCGAAAAACTTGCTGCTGAAGCAGGTGAAACAGTTA    100

BSNT_04060___    101 CTTTTGAAGACGTTTTGTTTGTTGGCGGAGACAACGTGAAAGTCGGCAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27960___rp    101 CTTTTGAAGACGTTTTGTTTGTTGGCGGAGACAACGTGAAAGTCGGCAAC    150

BSNT_04060___    151 CCTACAGTTGAAGGCGCAACAGTAACGGCTAAAGTTGAAAAACAAGGCCG    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27960___rp    151 CCTACAGTTGAAGGCGCAACAGTAACGGCTAAAGTTGAAAAACAAGGCCG    200

BSNT_04060___    201 CGCGAAAAAAATCACTGTTTTCAGATACAAACCAAAGAAAAACGTTCATA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27960___rp    201 CGCGAAAAAAATCACTGTTTTCAGATACAAACCAAAGAAAAACGTTCATA    250

BSNT_04060___    251 AAAAACAAGGTCATCGTCAGCCTTACACTAAAGTGACGATCGAAAAAATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27960___rp    251 AAAAACAAGGTCATCGTCAGCCTTACACTAAAGTGACGATCGAAAAAATC    300

BSNT_04060___    301 AACGCGTAA    309
                     |||||||||
BSU27960___rp    301 AACGCGTAA    309


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