Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_04059 and BSU27950

See Amino acid alignment / Visit BSNT_04059 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:23:22
# Commandline: needle
#    -asequence dna-align/BSNT_04059___ysxB.1.22522.seq
#    -bsequence dna-align/BSU27950___ysxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_04059___ysxB-BSU27950___ysxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04059___ysxB-BSU27950___ysxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04059___ysxB
# 2: BSU27950___ysxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 339
# Identity:     336/339 (99.1%)
# Similarity:   336/339 (99.1%)
# Gaps:           0/339 ( 0.0%)
# Score: 1668.0
# 
#
#=======================================

BSNT_04059___      1 ATGATTCAGGCAACAATCAGAAGGTCTCATGATAAAGGCATATTGTCTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27950___ys      1 ATGATTCAGGCAACAATCAGAAGGTCTCATGATAAAGGCATATTGTCTTT     50

BSNT_04059___     51 TGAAATGACGGGCCATGCGAATTTTGCTGAACATGGACAAGATCTTGTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27950___ys     51 TGAAATGACGGGCCATGCGAATTTTGCTGAACATGGACAAGATCTTGTTT    100

BSNT_04059___    101 GTGCCGGAGTGACAGCCGTTGTGTTTGGAGCCGTTAACGCGGTCATTGTG    150
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU27950___ys    101 GTGCCGGAGTGACAGCCGTTGTGTTTGGGGCCGTTAACGCGGTCATTGTG    150

BSNT_04059___    151 CTCGCGGGCTTCGAGCCGCTTCTTGATATAGGGGAGGACGGGGGGTATTT    200
                     ||||||||||||||||||||||||||||||||.|||||||||||.|||||
BSU27950___ys    151 CTCGCGGGCTTCGAGCCGCTTCTTGATATAGGAGAGGACGGGGGTTATTT    200

BSNT_04059___    201 TTATTTTGAATTCCCTGAATCTCTTGATCCAGAGGCACGCCAAAAAGCTC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27950___ys    201 TTATTTTGAATTCCCTGAATCTCTTGATCCAGAGGCACGCCAAAAAGCTC    250

BSNT_04059___    251 AGCTGCTGATTGAAGGCATGATTGTTTCGCTGGAGACAATCGAACGGGAT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU27950___ys    251 AGCTGCTGATTGAAGGCATGATTGTTTCGCTGGAGACAATCGAACGGGAT    300

BSNT_04059___    301 TACAAAGACAACTTGCGTGTGACCACAAACATAATATAG    339
                     |||||||||||||||||||||||||||||||||||||||
BSU27950___ys    301 TACAAAGACAACTTGCGTGTGACCACAAACATAATATAG    339


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